Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0764 |
Symbol | |
ID | 5868522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 873634 |
End bp | 874218 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545863 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_001667010 |
Protein GI | 167031779 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.58536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCA TCCAGTTGAT CGTTGGCCTG GGTAACCCTG GCCCCGAATA CGAACAGACC CGGCATAACG CAGGGGCTCT TTTCGTTGAA CGCATTGCCA GCGCCCAGCG AGTTTCGCTG ACTGCTGACA AAAAATATTT CGGCCTGACG GCTAAATTCA GCCATCAGGG CAACGACGTT CGTTTGTTGA TCCCTACCAC CTACATGAAC CGCAGCGGTC AGTCCGTGGC GGCCTTGGCC AATTTCTTCC GCATCAAGCC GGAAGCGATC CTGGTGGCAC ACGACGAACT CGACCTGCCC CCAGGCGTTG CCAAGCTCAA GCGCGGCGGC GGCCATGGTG GGCATAACGG CCTGCGCGAC ATCATCGCGC AGCTCGGTAA CCAGAACGAC TTCCACCGCC TGCGGCTTGG CATCGGCCAC CCGGGTGACG CCAAACTGGT ATCCAACTTC GTCCTGGGCC GCGCGCCGCG CGCCGAGCAG GAGAAGCTCG ACGCCAGCAT CGATTTTGCC CTCGGCGTGC TGCCGGATGT GCTTGCCGGC GATTTCGCCA AGGCGATGCG CGAGCTGCAC AGCCAGAAGG CCTGA
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Protein sequence | MTAIQLIVGL GNPGPEYEQT RHNAGALFVE RIASAQRVSL TADKKYFGLT AKFSHQGNDV RLLIPTTYMN RSGQSVAALA NFFRIKPEAI LVAHDELDLP PGVAKLKRGG GHGGHNGLRD IIAQLGNQND FHRLRLGIGH PGDAKLVSNF VLGRAPRAEQ EKLDASIDFA LGVLPDVLAG DFAKAMRELH SQKA
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