Gene PputGB1_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0758 
Symbol 
ID5868516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp863350 
End bp864297 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID641545857 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001667004 
Protein GI167031773 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.845455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC GCGTACTGAA CCCTGCCGCC GAACAGGCAG TCGCGTGGAT GGTGCGCCTG 
CGCTCCGGGC GAGACGATGC CCGGCAACAG GCGCTTTTTC AGCAGTGGCT GGGTGATGAC
CCGGCCAACG TCCATGCCTG GGAGCAATTG CAACGTGGCT TGGGCGAGCA CTTCGAGGTT
GTGCGCCGAG CTCCTGGCGC TTTGCGCGAT ACCTTGCTGC AGCCGGAAGT CGGTCGGCGC
GATGTGTTGC GGGCAATGGC CGGGCTTTCT GTGCTGGGTG GCAGTTTGTG GTTCGCCGCC
AGCAGCGATA CCGGCCAGGC ATTGACGGCC GATTTGCGTA CAGGCACCGG CGAACGTCGC
AGCCTGACGT TGGCTGATGG CAGCCGGCTG GCATTGAATG CCGACAGTGC GGTCGACCTC
GCCTTTTCCG GCAGCCATCG GCTGGTGCGC TTGCGCAGGG GAGGGCTGGT GGTGCAGGTG
GCTGCAGACC CGAGCCGTCC GTTCATCGTG CGTAGCGCGC AAGGTGATGT GCGCGCACTG
GGTACGCGTT TTCTGGTCGA GCAACTGGCC GACGCCACCC GCGTGGTGGT GCTGGAGCAC
GCCGTGCGCG CTTCGTTGCC CAATGGCACC GAGCTGGACT TGGCAGAGGG TCAGGCAGCG
TTGTTGCATG CGCAGCGCAT CGAGCCACTG GCGGCGGGGC AGGCCTACCG CGCCGACTGG
GTGCAAGGTC ACCTCAGTGT GCTGGACGAG CCCCTGGCGT TGGTTATCGA TGCCTTGCGC
CCGTATCGCC CGGGGTTCGT CCGTGTCAGC CCGCAGGTGC GCAACCTGCG GGTACAGGGG
GTGTTCCCGC TGGATGACAG CGAGCGCACC TTGGCTGCCC TTGAAGAGAC GATGCCGATC
AGCGTGAAAC GCTACGGTGC CTGGCTGACC TTGATCGAAG CGCGCTGA
 
Protein sequence
MNRRVLNPAA EQAVAWMVRL RSGRDDARQQ ALFQQWLGDD PANVHAWEQL QRGLGEHFEV 
VRRAPGALRD TLLQPEVGRR DVLRAMAGLS VLGGSLWFAA SSDTGQALTA DLRTGTGERR
SLTLADGSRL ALNADSAVDL AFSGSHRLVR LRRGGLVVQV AADPSRPFIV RSAQGDVRAL
GTRFLVEQLA DATRVVVLEH AVRASLPNGT ELDLAEGQAA LLHAQRIEPL AAGQAYRADW
VQGHLSVLDE PLALVIDALR PYRPGFVRVS PQVRNLRVQG VFPLDDSERT LAALEETMPI
SVKRYGAWLT LIEAR