| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0754 |
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| Symbol | |
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| ID | 5868512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 858904 |
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| End bp | 860001 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641545853 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001667000 |
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| Protein GI | 167031769 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.467397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CCAGGCCAGC GCCGCCCCCG TCAGCCCCTG ATCGCGGTAT GCGCTGGGTG
CTGTTGCTAA TTGCCGTGAG CCTGCTTTGG TACCTGCTGG CGGACCGCTT CACGCCATAC
ACCCAGCAGG CACGCCTGCA GGCCTACGTG GTGCCGGTGG CCGCCGAAGT GGCCGGGCAG
ATCAAGCGTG TGGCCGTCGG CAACAACCAG GAAGTGCGCC AGGGCGATGT GCTGTTCGAA
CTCGACCAAG AACAGTACCG CATTGCCTTG GCCCGCGCCG AAGCCGATCT CGATACCGTG
CGCCGGCAGA TCGGCGCCAG TACCGCTGGC ATCGACTCCG CTCAGGCTGC GCTCGTGGCG
GCCCAGGCCA ATGAGCGCAA GGCGCGGCAG GACGCAGAAC GCCTCAAGCG GCTGATTGAC
GAAGACCCCG GCACGGTATC GGTGCGCCGC CTGGAAGGCG CACAGGCCAC CCGTGACCAG
GCCATAAGCC AAGTGGCGGC GGCCCGTGCT GAAGTGGTGC GCGCCCGTGA ACAGCAGGGC
GGTGCACAGG AGGACAATGC CCAGCTGCGC AGTGCAGCGG CCAACGTGGA AAAGGCCCGC
CTGGACCTTG CCCGTACCGT GGTACGCGCT GATGCGAACG GGTTGATCAC CGACTTGCGC
ACCGACGTTG GCCACTATGT CGGGGCGGGC AGCCCGATGA TGACCCTGAT CAGTATTCAT
GACGTGTGGA TAAGTGCCGA CATGACCGAG AACAACCTCG GTCGGCTGCG CCCCGACACG
CCGGTGCTGG TGGTGCTCGA CGCGCTGCCC GGCACTGTGT TGAAGGGGCG TATACGCAGC
ATTGGCTACG GTGTGAGCGT GGGCCAGCCT GCAGCGCCGG GTACGCTGCC GACCGTGCAG
AACAGCCGCG AGTGGCTGCG TTCGGCGCAG CGCTTCCCGG TGATCGTCGA GCTGGAGCGC
GACCAGCTTC AGGACAAGAC CGTGCTGCGG GTCGGTGGCC AGGCCGAGGT CATGGCCTTG
CCCGGCGAAG GCAACCCCCT GAACCTGCTG GGCCGGTTGT TCATGTGGCT GATGAGCTGG
CTGTCATATG CCTATTGA
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| Protein sequence | MSDTRPAPPP SAPDRGMRWV LLLIAVSLLW YLLADRFTPY TQQARLQAYV VPVAAEVAGQ
IKRVAVGNNQ EVRQGDVLFE LDQEQYRIAL ARAEADLDTV RRQIGASTAG IDSAQAALVA
AQANERKARQ DAERLKRLID EDPGTVSVRR LEGAQATRDQ AISQVAAARA EVVRAREQQG
GAQEDNAQLR SAAANVEKAR LDLARTVVRA DANGLITDLR TDVGHYVGAG SPMMTLISIH
DVWISADMTE NNLGRLRPDT PVLVVLDALP GTVLKGRIRS IGYGVSVGQP AAPGTLPTVQ
NSREWLRSAQ RFPVIVELER DQLQDKTVLR VGGQAEVMAL PGEGNPLNLL GRLFMWLMSW
LSYAY
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