Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0752 |
Symbol | |
ID | 5868510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 856292 |
End bp | 857389 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545851 |
Product | hypothetical protein |
Protein accession | YP_001666998 |
Protein GI | 167031767 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0379564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTCGA GTTTCAAGCT GGACAGCGCC CTGTCGCGGG GCTTGCTCGA TGTACTCATC AAGGCCGGCC TGGTGGCAGC CTTGGTGATC TTCTCCTTCC AGGTATTCCA ACCGTTCCTG GAGTTGATGC TGTGGGCGGT GATCCTGGCG GTCACGTTGT ACCCGTTGCA TTGCCGTATC CAGCGCCGCA CTGGGCTCAA GCAAGGCTAT GCGGCGACGC TGGTGGTGCT GCTGGTACTG GTGGTGCTGT TGGTGCCGAT CTACCTGGTC GTGATGTCCA TTGGTGAATC GGTGGACAGC CTGGTGACCT TGCTCAAGAG CGGTGCCTGG AGCGTGCCGG TCCCACCTGA CTCCGTGGCG AGCTGGCCAC TGATCGGGCC GAAGGTGCAT GCGCTGTGGT TGGCGGCCTC CGAAAACATG GCCAGTGTAC TGAATCAGTG GATGCCCCAG ATCAAGGGTG CCGGGCTTAC CGTACTGGGC GCTGCGGCCA GTGCCGGTGG GGCCTTCCTG CTGTTCATCG GCGCGATCAT CATTTCCGGG GTCATCATGG CCTTCGGTGA ACGCGGTGAA GTCGCAGCGC AGCGTATTGC CATGCGGGTT TCGGGCGAAG AGCGCGGTAA GCCCTTGGCC ACGCTGTGCA CCGCTACCAT TCGCGCGGTG GCGCAAGGCG TGATCGGCAT TGCGTTCATC CAAATGCTGT TGATCGGTGT CGGTTTCGTC ATCAAAGGCG TACCAGGGGC AGGGATGCTG GCCATCGTCA TCCTCATGCT TGGGATTGCC CAAGCCCCGG CCACGTTGGT CACGGTGCCG GTAATCATTT ATGTATTCAA CACCGACGGC TTCACGGTGG CGGCCATCGT TTTTGCCGTC TACACCTTCG TCGCCGGCCT TGCCGATAAC GTGCTCAAAC CAATGCTGCT GGGGCGCGGG GTCGATGTGC CGATGCCGGT GGTGCTGATT GGGGCACTGG GCGGCATGGT GGTCAAAGGC ATCATCGGGT TGTTCATTGG CCCGGTAATC CTAGGCGTGA CCTACGTGTT GTTCTGGCAA TGGGTTGCGC TGCAGGTGCC GGAGCAACCG GCACCCCCCG CCGCCTGA
|
Protein sequence | MQSSFKLDSA LSRGLLDVLI KAGLVAALVI FSFQVFQPFL ELMLWAVILA VTLYPLHCRI QRRTGLKQGY AATLVVLLVL VVLLVPIYLV VMSIGESVDS LVTLLKSGAW SVPVPPDSVA SWPLIGPKVH ALWLAASENM ASVLNQWMPQ IKGAGLTVLG AAASAGGAFL LFIGAIIISG VIMAFGERGE VAAQRIAMRV SGEERGKPLA TLCTATIRAV AQGVIGIAFI QMLLIGVGFV IKGVPGAGML AIVILMLGIA QAPATLVTVP VIIYVFNTDG FTVAAIVFAV YTFVAGLADN VLKPMLLGRG VDVPMPVVLI GALGGMVVKG IIGLFIGPVI LGVTYVLFWQ WVALQVPEQP APPAA
|
| |