Gene PputGB1_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0752 
Symbol 
ID5868510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp856292 
End bp857389 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID641545851 
Producthypothetical protein 
Protein accessionYP_001666998 
Protein GI167031767 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0379564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCGA GTTTCAAGCT GGACAGCGCC CTGTCGCGGG GCTTGCTCGA TGTACTCATC 
AAGGCCGGCC TGGTGGCAGC CTTGGTGATC TTCTCCTTCC AGGTATTCCA ACCGTTCCTG
GAGTTGATGC TGTGGGCGGT GATCCTGGCG GTCACGTTGT ACCCGTTGCA TTGCCGTATC
CAGCGCCGCA CTGGGCTCAA GCAAGGCTAT GCGGCGACGC TGGTGGTGCT GCTGGTACTG
GTGGTGCTGT TGGTGCCGAT CTACCTGGTC GTGATGTCCA TTGGTGAATC GGTGGACAGC
CTGGTGACCT TGCTCAAGAG CGGTGCCTGG AGCGTGCCGG TCCCACCTGA CTCCGTGGCG
AGCTGGCCAC TGATCGGGCC GAAGGTGCAT GCGCTGTGGT TGGCGGCCTC CGAAAACATG
GCCAGTGTAC TGAATCAGTG GATGCCCCAG ATCAAGGGTG CCGGGCTTAC CGTACTGGGC
GCTGCGGCCA GTGCCGGTGG GGCCTTCCTG CTGTTCATCG GCGCGATCAT CATTTCCGGG
GTCATCATGG CCTTCGGTGA ACGCGGTGAA GTCGCAGCGC AGCGTATTGC CATGCGGGTT
TCGGGCGAAG AGCGCGGTAA GCCCTTGGCC ACGCTGTGCA CCGCTACCAT TCGCGCGGTG
GCGCAAGGCG TGATCGGCAT TGCGTTCATC CAAATGCTGT TGATCGGTGT CGGTTTCGTC
ATCAAAGGCG TACCAGGGGC AGGGATGCTG GCCATCGTCA TCCTCATGCT TGGGATTGCC
CAAGCCCCGG CCACGTTGGT CACGGTGCCG GTAATCATTT ATGTATTCAA CACCGACGGC
TTCACGGTGG CGGCCATCGT TTTTGCCGTC TACACCTTCG TCGCCGGCCT TGCCGATAAC
GTGCTCAAAC CAATGCTGCT GGGGCGCGGG GTCGATGTGC CGATGCCGGT GGTGCTGATT
GGGGCACTGG GCGGCATGGT GGTCAAAGGC ATCATCGGGT TGTTCATTGG CCCGGTAATC
CTAGGCGTGA CCTACGTGTT GTTCTGGCAA TGGGTTGCGC TGCAGGTGCC GGAGCAACCG
GCACCCCCCG CCGCCTGA
 
Protein sequence
MQSSFKLDSA LSRGLLDVLI KAGLVAALVI FSFQVFQPFL ELMLWAVILA VTLYPLHCRI 
QRRTGLKQGY AATLVVLLVL VVLLVPIYLV VMSIGESVDS LVTLLKSGAW SVPVPPDSVA
SWPLIGPKVH ALWLAASENM ASVLNQWMPQ IKGAGLTVLG AAASAGGAFL LFIGAIIISG
VIMAFGERGE VAAQRIAMRV SGEERGKPLA TLCTATIRAV AQGVIGIAFI QMLLIGVGFV
IKGVPGAGML AIVILMLGIA QAPATLVTVP VIIYVFNTDG FTVAAIVFAV YTFVAGLADN
VLKPMLLGRG VDVPMPVVLI GALGGMVVKG IIGLFIGPVI LGVTYVLFWQ WVALQVPEQP
APPAA