Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0741 |
Symbol | |
ID | 5868499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 842092 |
End bp | 844503 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545840 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001666987 |
Protein GI | 167031756 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGTG TCAGCCTTGC CCGTAGTTGC CCAGGCCTGA TGGCCCTGCT GGCCTTTATG CTGGTGCTCG CCAGCCCGGC GTGGTCGGCC CCGGCCACGC CATTGTCCAA TTTGGCGGCT GCCGAAGCGC CAGCACTGGA CGAAAACGCC AGCCTTGAAC AGCTGAACGA CCGCCTGGAC CAGATCCGTC AGGGCGTCAC CAGCGAGGCC AACGACGACC TGCTGTCGCA ACTGCGTCTT GCAGCCATGC AGGTTCAGCG TCAGGCCGAT GCATTGAGTG CACAGCGCAC TGCCGATGTG GGAAAACTCG ACGACAAGCT GAAGGTCATC GGCCCGGCCC AGCCGGACGA GGCACTCACT CTGACCCAGC AGCGCAAAGC GCTGGAGGCT GAGAAAAAGG CGCTGGTAGC CCAGCAGGAC CAGGCCATCA AGCTGACCCA GTCGGCCCGC GACCTGTCCA CGCAAATCGT CAACCTGCGC CGCAGCCAGT TCAACTCGCA GATCACCAGC CGTGCCGCTT CGCCACTGAG CCCGGCGTTC TGGCAGAGCA TCATCCGCCC CACCCAGGAC GACGTGGCGC GCCTGCGCGA CCTGCGCGGC GAGGCAGCCG ATGCCATCAA CAGCGCCTTC AGCGCCGATC ACCGCTGGCT GTTCATTACC AGCCTGGTGG CGGCGATCCT GGTATGGACC TTGGTGCGCC GCGTGCTCGA GCGCTTGCTG GCCAGTGCCA TGGTCGGCTG GCTGCCCGAA GGGCGCCTGC GCCGCAGCGC TTTGGCCCTT GGTGTCAGCC TGGCAACCTT GGGTACCATC GCCGGTTCTG TTTCGTTGCT GCGCTGGGGG CTGGAAAGCA GTGCAGAGTT GGGTTCGGAT ATCGCCAGCC TGACCAACCA CATTCTCGCC CTGGTCGTGT TCAGTGCCTT CATTACCGGC CTGGGCCGCG CCATGCTGAT GCTGCAGCGG CCGTCCTGGC GGCTGCCGCC GATCCATGAC GAAGTTGCCA GCGCGCTGGG CTGGTTCCCG AAGGTACTGG CATTGGCCCT GATGGTCATG ATGACCATGG AGCGCATGAA CAGTGTGATC GGCGCCAGCC TGGCGCTGAC GGTGGCCGTC AACGGGCTGA CCGCACTGGT AGTGGCGTTC ATCTTTGCCG GCGCGTTGCT GCGTTATCGC CACACCCTGC GCAAGCATGA ACTGGAGCGC CCGACGGGCC TGGCTGGACT GATCCCGTTC GTGATGGTCA TCTGGCTGGC GTTGATCCTG CTGGCACTGC TCACCGGCTA CCTGACGCTT GCCTATTTCC TCACTGCCAA GTTGCTGTGG GTCAGCCTGG TGGTCACTTG TGCCTACTTG CTGACCACCT TCTTCGGCGA CCTGTGCGAA ACCCTGCTGT CGCCACGCCA GCCCGGAGGC CTGGCGCTGG CCTCGACCCT GGGCCTGGCA CCTCGTCACC AGGCGCAAGC CAGCACCATC CTGGCTGGCA TCGGCCGCAC CATCGTGCTG TTCCTGGCGC TGTTGCTGGT GTTGATGCCA TCGGGTACCA GCCCCAGCGA ACTGCTGCTG AGCCTGGGCG ATTGGGACGG CACCGGCGGC AAGCTGCTCG GCAACCTGAA TATCGTGCCG CAGGACATCC TGCTGGCCCT GGCGATTTTC TTGGGTGGCC TGTTCGCCAT CCGTGTGGTC AAGCGCTGGC TGAGCGATCG CCTGCTGCCG GAAACCGACA TGGACGCCGG CATGCGGGCC TCGCTGGTGA CCCTGGTGGG TTACCTGGGT TTCCTGTTCC TGGCCATGCT GGTGATGTCG ACCTTGCGCA TCAATCTCAC CAGCCTGACC TGGGTGGTCA GTGCGCTGTC GGTCGGTATC GGTTTCGGCC TGCAGCAGAT TGTGCAGAAC TTTATCTCCG GCCTGATCCT GTTGACCGAG CGCCCGGTGA AGGTGGGTGA TTGGGTGAGC CTGGCGGGTG TCGAGGGCGA TATCCGCCGC ATCAACGTGC GCGCCACCGA AATCCAGATG TCAGACCGTT CAACGGTGAT CGTGCCCAAC TCGCAGTTCA TCTCGCAGAA CGTGCGCAAC GTGACCATGG GCAATGCGCT GGGTGTGGTC AGCATTACCT TGACACTGCC GCTGGAGACC GATGCCAACC AGGTGCGTGA GCTGCTGCTG GCGGCCTACC ACGAGCATGA GGCGATTCTG GATGCGCCGG CTTCTTCGGT GTCGTTCAAG GACCTGACGA CCAGTGGCAT GGTGATTGGC GTCAGCGGCT ACGTGGCCGG GCCGCGGCAG GTGTCAGGCA CCCGCAGCGA CCTGCTGTTC ACCATTCTTG GGCGCCTGCG TGACGAAGGT ATTCCCCTGT CTTCGCCACA GAGCATGGTA CTGGTGCAAG AGGGTGTGCG CCCCGCTGAC GAATCGGTGT GA
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Protein sequence | MRRVSLARSC PGLMALLAFM LVLASPAWSA PATPLSNLAA AEAPALDENA SLEQLNDRLD QIRQGVTSEA NDDLLSQLRL AAMQVQRQAD ALSAQRTADV GKLDDKLKVI GPAQPDEALT LTQQRKALEA EKKALVAQQD QAIKLTQSAR DLSTQIVNLR RSQFNSQITS RAASPLSPAF WQSIIRPTQD DVARLRDLRG EAADAINSAF SADHRWLFIT SLVAAILVWT LVRRVLERLL ASAMVGWLPE GRLRRSALAL GVSLATLGTI AGSVSLLRWG LESSAELGSD IASLTNHILA LVVFSAFITG LGRAMLMLQR PSWRLPPIHD EVASALGWFP KVLALALMVM MTMERMNSVI GASLALTVAV NGLTALVVAF IFAGALLRYR HTLRKHELER PTGLAGLIPF VMVIWLALIL LALLTGYLTL AYFLTAKLLW VSLVVTCAYL LTTFFGDLCE TLLSPRQPGG LALASTLGLA PRHQAQASTI LAGIGRTIVL FLALLLVLMP SGTSPSELLL SLGDWDGTGG KLLGNLNIVP QDILLALAIF LGGLFAIRVV KRWLSDRLLP ETDMDAGMRA SLVTLVGYLG FLFLAMLVMS TLRINLTSLT WVVSALSVGI GFGLQQIVQN FISGLILLTE RPVKVGDWVS LAGVEGDIRR INVRATEIQM SDRSTVIVPN SQFISQNVRN VTMGNALGVV SITLTLPLET DANQVRELLL AAYHEHEAIL DAPASSVSFK DLTTSGMVIG VSGYVAGPRQ VSGTRSDLLF TILGRLRDEG IPLSSPQSMV LVQEGVRPAD ESV
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