| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0737 |
|---|
| Symbol | |
|---|
| ID | 5868495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 838656 |
|---|
| End bp | 839612 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641545836 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001666983 |
|---|
| Protein GI | 167031752 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGC CTGATGATAC GCCGGCACAG GTGCAGGTCG ATCAGGCCAT CGACTGGTTG
GTGAAACTGC GCTTCGACAG CCCCAGCGCG CGTACCGAGC AGCAGTTTCA GCAGTGGCTG
GGCAGCCACC CGCACAACCC CTTGGCCTGG CAGCGGGTCA GTCATCTAAG CGACGAGCTG
GCCGGGCTGC CCAAGGACCT GAGCCGACGC ACCCTGGAGG GTAGCCAGCG CCAACGCGTC
AGCCGCCGGG ACCACCTGAA GTTGCTGGGG CTGTTGGCCG TAGGCGGCAG CCTGGGCTGG
GCCGCACGCG AACCGCTGGG CCTGCCACAA CTGCTGGCCG ACAGCAGCAC CGCCACGGGT
GAACGGCGCC AGTGGCAAAG TACTGACGGT AGCCGTATCC AGCTCAACAC TGCCAGCGCC
ATCGACCTGC ACTTCAGCGC GCAGCAACGC CAGCTGGAGC TGATACGGGG CGAAATCAGC
CTGGACAGCA ACCCGAATGA CAACCGCCCG TTCCACATCG ACACCCGTAT CGGTCCGCTG
ACCACCGTCG ATGGCCAACT GTTGCTGCGT GAAAACAGCC AGGGCCTGCT GCTGTCGGTG
CGTCGAGGTG AAGTCACGCT GTTCCCTGCC TCGGCCTCAC CGAGGCAGGT GCTGCCAGGT
GAAACCTTGC AAGTCGGGAC CAACGGCAGC ATCCAGGCGT TGGCGCTGCA CAGCGACCCT
TGGGGCTGGA CTGACGGGGT ACTCAGCGTG CAACAAATGC CACTTGCCGA ATTTGTCAGC
GAACTCGGCC GCTACCGCCC GGGCCTGTTG CGCTGCGCTC CAGAGGTGGC GGGCCTGAAG
GTCTCAGGCA CCTATCAGTT GGCCGACACC GAGCAAATCC TGCAGTTGCT CAGCCGCAGC
CTGCCGGTGC GGGTCGACTA CAGGACCCGC TACTGGGTGA GCATCGGCGC GGCGTGA
|
|---|
| Protein sequence | MPMPDDTPAQ VQVDQAIDWL VKLRFDSPSA RTEQQFQQWL GSHPHNPLAW QRVSHLSDEL
AGLPKDLSRR TLEGSQRQRV SRRDHLKLLG LLAVGGSLGW AAREPLGLPQ LLADSSTATG
ERRQWQSTDG SRIQLNTASA IDLHFSAQQR QLELIRGEIS LDSNPNDNRP FHIDTRIGPL
TTVDGQLLLR ENSQGLLLSV RRGEVTLFPA SASPRQVLPG ETLQVGTNGS IQALALHSDP
WGWTDGVLSV QQMPLAEFVS ELGRYRPGLL RCAPEVAGLK VSGTYQLADT EQILQLLSRS
LPVRVDYRTR YWVSIGAA
|
|---|
| |