| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0712 |
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| Symbol | |
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| ID | 5868469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 814975 |
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| End bp | 817413 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545810 |
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| Product | peptidase S16 lon domain-containing protein |
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| Protein accession | YP_001666958 |
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| Protein GI | 167031727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0968919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATC CTGTCGCTGC GCGCCTGCGT CTCGCGCCTG AAGCCCTGAC CCGGCGTTTC
TCCCCCGAGC AGTTTGCCTT TACCAATACC GACGATCTGG AGCCGTTTCG CGGAGTCCTG
GGCCAGGAGC GTGCTGTCGA GGCCCTGCAG TTTGGCGTGG CCATGCCGCG CCCTGGTTAC
AACGTGTATG TAATGGGTGA GCCCGGTACC GGGCGCTTCT CGTTCGTCAA GCGCTACCTC
AAGGCCGAGG GCAAGCGCCA GCAGACCCCG GCCGACTGGG TCTACGTCAA CCACTTCGAC
GACACCCGTG AGCCACGGGC ACTGGAGCTG CCGTCTGGGA GCGCCGCCGA GTTCATCAGC
GACATGGGCG GGTTGATCGA CAACCTGCTG TCCACGTTCC CTGCCGTTTT CGAACACCCG
TCCTATCAGC AGAAGAAGGG TGCTATCGAC CGTGCCTTCA ACCAGCGCTA TGACCGCGCC
CTGGACGTGA TAGAGCGCGC ATCGCTGGAA AAAGACGTGG CCTTGTATCG CGATGCCAGC
AACGTCGCCT TCACGCCGAT GGCCGATGGC AAGGCGCTGG ATGAAGCCGA GTTCGCCCAG
TTGCCGGAAG CGGTACGCGA GCAGTTCCAC GAAGACATTG CCTTGCTCGA GGAACAGCTG
AACGAAGAGC TGGCCAGCTT GCCGCAGTGG AAGCGCGAGT CGAACAACCA ACTGCGCCAG
CTGAACGAAG AAACCATCAC CCTGGCGCTG CAGCCGCTGT TGGCGCCGCT GTCGGAAAAG
TACGCCGAGA ACGCGGCGGT CTGCGCATAC CTGCAATCGG TGCAGTTGAA CCTGCTGCGT
ACCGTGGTCG AGCAACTGGT GGATGACAGC AAGACCGACG CCGTGGCCCG CAAGCTGCTC
GAAGAGCAGT ACGCGCCCAG CCTGGTGGTG GGCCATCACG CAGCCGGCGG CGCGCCGGTG
GTGTTCGAGC CGCATCCGAC CTATGACAAC CTGTTCGGCC GTATCGAATA CAGCACCGAC
CAAGGCGCGC TGTACACCTC CTATCGCCAA CTGCGCCCAG GCGCGCTGCA CCGTGCCAAC
GGTGGCTTCT TGATTCTTGA AGCCGAGAAG ATGCTGGGCG AGCCGTTCGT TTGGGATGCG
CTCAAGCGTG CACTGCAGTC GCGCAAGCTG AAGATGGAGT CGCCGATCGG TGAACTGGGC
CGTGTCGCCA CGGTCAGCCT GCAGCCGCAG ATGATTCCGC TCAACGTCAA ACTGGTGATC
ATCGGCTCGC GCCAGCTGTA CTACGCGCTG CAGGACCACG ACCCGGATTT CCAGGAGATG
TTCCGCGTGC TGGTGGACTT CGACGAAGAC ATGCCGATGG TCGACGAGAA CCTGGAGCAG
TTCGCCCAGC TGTTGCGCAC CCGCACCAAC GAAGAGGGCA TGGCGCCGCT GACCAGCGAC
GCCGTGGCGC GCCTGGCCAC CTACAGCGCT CGCCTGGCTG AAAACCAGTC GCGCCTGTCG
GCGCGTATCG GCGACCTGTT CCAGTTGGTG AGCGAGGCTG ATTTCATTCG CCAGCTGGCC
AGTGACGAAA TGACCGACGC CGGCCACATC GAGCGTGCGC TCAATGCCAA GGCCACCCGC
ACCGGGCGTG TGTCGCAGCG GGTGCTGGAC GACATGCTCG CCGGCATCAT CCTCATCGAT
ACCGAAGGTG CTGCAATCGG CAAGTGCAAC GGCCTCACGG TGCTGGAGGT GGGCGACTCG
GCGTTCGGTA TGCCGGCACG TATTTCGGCC ACTGTGTACC CAGGCGGCAG CGGCATTGTC
GACATCGAGC GTGAGGTCAA CCTTGGCCAG CCGATCCACT CCAAAGGCGT GATGATCCTT
ACCGGTTATC TGGGCAGCCG CTATGCCCAG GAATTCCCGC TGGCGATTTC CGCGAGCATC
GCCCTGGAAC AGTCCTACGG CTACGTGGAC GGTGACAGCG CCTCGCTGGG CGAAGCCTGC
ACGCTGATTT CAGCCTTGTC GCGCACGCCG CTCAAGCAGT GTTTCGCTAT CACTGGTTCC
ATCAACCAGT TTGGTGAAGT GCAGGCAGTG GGCGGGGTCA ACGAGAAGAT CGAGGGCTTC
TTCCGCCTCT GCGAGGCGCG AGGCCTGACG GGCGAGCAGG GGGTGATCAT TCCGCGTGCC
AACGTTGCCA CCCTGATGCT TGATGAGCGC GTGCTGCAGG CCGTGGAGAA CGGCATGTTC
CACGTCTATG CGGTCAGCCA GGCTGATGAG GCGCTGAGCC TGCTGGTGGG CGAGGAGGCC
GGGGTGCTCG ACGACAAGGG GCTGTTCACC GAGGGCAGCG TCAATGCTCG GGTGGTGGAG
CGCCTGCGTG AAATTGCCGA GATGATCAGC GAAGAAGAAA TCGAGAAGGC AGAAAAGGAA
CACCTGGAAG AGGTGATTGC CAAGGCCAAA CCGGCTTGA
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| Protein sequence | MPDPVAARLR LAPEALTRRF SPEQFAFTNT DDLEPFRGVL GQERAVEALQ FGVAMPRPGY
NVYVMGEPGT GRFSFVKRYL KAEGKRQQTP ADWVYVNHFD DTREPRALEL PSGSAAEFIS
DMGGLIDNLL STFPAVFEHP SYQQKKGAID RAFNQRYDRA LDVIERASLE KDVALYRDAS
NVAFTPMADG KALDEAEFAQ LPEAVREQFH EDIALLEEQL NEELASLPQW KRESNNQLRQ
LNEETITLAL QPLLAPLSEK YAENAAVCAY LQSVQLNLLR TVVEQLVDDS KTDAVARKLL
EEQYAPSLVV GHHAAGGAPV VFEPHPTYDN LFGRIEYSTD QGALYTSYRQ LRPGALHRAN
GGFLILEAEK MLGEPFVWDA LKRALQSRKL KMESPIGELG RVATVSLQPQ MIPLNVKLVI
IGSRQLYYAL QDHDPDFQEM FRVLVDFDED MPMVDENLEQ FAQLLRTRTN EEGMAPLTSD
AVARLATYSA RLAENQSRLS ARIGDLFQLV SEADFIRQLA SDEMTDAGHI ERALNAKATR
TGRVSQRVLD DMLAGIILID TEGAAIGKCN GLTVLEVGDS AFGMPARISA TVYPGGSGIV
DIEREVNLGQ PIHSKGVMIL TGYLGSRYAQ EFPLAISASI ALEQSYGYVD GDSASLGEAC
TLISALSRTP LKQCFAITGS INQFGEVQAV GGVNEKIEGF FRLCEARGLT GEQGVIIPRA
NVATLMLDER VLQAVENGMF HVYAVSQADE ALSLLVGEEA GVLDDKGLFT EGSVNARVVE
RLREIAEMIS EEEIEKAEKE HLEEVIAKAK PA
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