Gene PputGB1_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0706 
Symbol 
ID5868463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp807705 
End bp809372 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content63% 
IMG OID641545804 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001666952 
Protein GI167031721 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.483075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCAAT ACGTCTACAC CATGCATCGG CTGAGCAAGG TCGTGCCGCC GAAGCGGGAA 
ATTCTCAAGA ACATTTCCCT GTCGTTCTTC CCGGGCGCCA AGATTGGCGT GCTCGGCCTG
AACGGCGCCG GTAAATCGAC CCTGCTGCGG ATCATGGCGG GCGTCGACAA GGAATTCGAC
GGCGAAGCCC GTCCGATGCC CGACATCAAC GTGGGTTACC TGCCCCAGGA ACCGCAACTG
GACGCGACCA AGACCGTGCG TGAAGTGGTC GAGGAAGCGG TCAGCGTGAT CAAGGACGCC
CAGGCGCGCC TGGACGAGGT CTACGCCGCC TACGCCGACC CGGATGCCGA CTTCGACAAG
CTGGCCGCCG AGCAGGCCAA GCTGGAAGCC ATCCTGCAGG CCGCCGACGG CCACAACCTG
GAGCGCCAAC TGGACGTCGC CGCCGATGCC CTGCGCCTGC CGGCCTGGGA TGCGCGCATC
GAACACCTGT CTGGTGGTGA GAAGCGCCGT GTGGCCCTGT GCCGCCTGCT GCTGTCGGCC
CCCGACATGC TGCTGCTCGA CGAACCAACC AACCACCTGG ACGCCGACTC GGTGGCCTGG
CTTGAGCGCT TCCTGCACGA CTTCCCTGGC ACCGTGGTAG CCATTACCCA CGACCGTTAT
TTCCTCGACA ACGTCGCCGG CTGGATCCTG GAACTGGACC GCGGCGCCGG TATCCCGTAC
GAAGGCAACT ACTCGGGCTG GCTGGAAGCC AAGTCGGACC GTCTGGCGCA GGAATCCAAG
CAGCAGAGCG CCCACGAGAA GGCCATGAAA GAGGAACTGG AGTGGGTGCG CAAAGGCGCC
AAGGCCCGCC AGTCCAAGTC CAAGGCCCGT CTGCAGCGCT TCGAAGAAAT GCAGTCGCAG
GAATTCCAGA AACGCAGCGA AACCAACGAG ATCTACATCC CGGCCGGTCC GCGCCTGGGT
GACAAGGTCA TCGAGTTCAA GAACGTCACC AAGGGCTACG GCGACCGCGT GCTGATCGAC
AACCTGTCGT TCGCCATGCC CAAGGGTGCC ATCGTCGGCG TGATCGGTGG TAACGGTGCC
GGTAAGTCGA CGCTGTTCCG CATGCTGATG GGCAAGGAGC AGCCAGACTC GGGCAGCATC
GAGATCGGTG AAACCGTGCA ACTGGCCTGT GTGGACCAGA GCCGCGAGGA CCTGGACGGC
GCCAAGACCG TGTTCCAGCA GATCTCCGAC GGCTCCGACC AGATCCGCAT CGGCAACTAC
GAGATCCCTT CGCGTACCTA CGTTGGCCGC TTCAACTTCA AAGGTGGCGA CCAGCAAAAA
TTCGTCAAGG ACCTGTCCGG TGGTGAGCGT GGCCGCCTGC ACCTGGCGCT GACCCTGAAG
GAGGGCGGTA ACGTCCTGCT GCTCGACGAA CCGTCCAACG ACCTCGACGT CGAAACCCTG
CGTTCGCTGG AAGAGGCCCT GCTGGACTTC CCGGGCGCCG CGATCGTGAT TTCCCACGAC
CGTTGGTTCC TGGACCGTGT GGCTACCCAC ATCCTGGCGT ACGAAGACGA CTCGAACGTG
GTGTTCTTCG AAGGTAACTA CACCGAGTAC GAAGCGGACC GCAAGAAGCG CCTGGGCGAT
GCCGCTGCCC AGCCGCACCG TGTACGGCAC AAGAAGCTGG CTCAGTAA
 
Protein sequence
MAQYVYTMHR LSKVVPPKRE ILKNISLSFF PGAKIGVLGL NGAGKSTLLR IMAGVDKEFD 
GEARPMPDIN VGYLPQEPQL DATKTVREVV EEAVSVIKDA QARLDEVYAA YADPDADFDK
LAAEQAKLEA ILQAADGHNL ERQLDVAADA LRLPAWDARI EHLSGGEKRR VALCRLLLSA
PDMLLLDEPT NHLDADSVAW LERFLHDFPG TVVAITHDRY FLDNVAGWIL ELDRGAGIPY
EGNYSGWLEA KSDRLAQESK QQSAHEKAMK EELEWVRKGA KARQSKSKAR LQRFEEMQSQ
EFQKRSETNE IYIPAGPRLG DKVIEFKNVT KGYGDRVLID NLSFAMPKGA IVGVIGGNGA
GKSTLFRMLM GKEQPDSGSI EIGETVQLAC VDQSREDLDG AKTVFQQISD GSDQIRIGNY
EIPSRTYVGR FNFKGGDQQK FVKDLSGGER GRLHLALTLK EGGNVLLLDE PSNDLDVETL
RSLEEALLDF PGAAIVISHD RWFLDRVATH ILAYEDDSNV VFFEGNYTEY EADRKKRLGD
AAAQPHRVRH KKLAQ