| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0703 |
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| Symbol | glyA |
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| ID | 5868460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 801465 |
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| End bp | 802718 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545801 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001666949 |
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| Protein GI | 167031718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.602975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCC GTGATTTGAC CATTGCCAAG TACGACGCCG AGCTCTTCGA AGCCATGCAG
CAAGAAGCCC TGCGCCAGGA AGAGCATATC GAGCTGATCG CTTCGGAAAA CTACACCAGC
CCGGCCGTCA TGGAAGCTCA GGGCTCGGTC CTGACCAACA AGTACGCCGA AGGCTACCCA
GGCAAGCGCT ACTACGGTGG TTGCGAGTAC GTCGACATCG TCGAGCAACT GGCCATCGAC
CGTGCCAAGG AGCTGTTCGG CGCCGACTAC GCCAACGTCC AGCCGCACGC TGGCTCCCAG
GCCAACGCTG CCGTCTACCT GGCCCTGCTG TCGGCCGGTG ACACCATCCT GGGCATGAGC
CTGGCCCACG GTGGTCACCT GACCCACGGT GCTTCGGTAA GCTCGTCGGG CAAGCTGTAC
AACGCCATCC AGTACGGCAT CGACGGCAAC GGCCTGATCG ACTACGACGA AGTCGAGCGC
CTGGCTGTCG AGCACAAGCC AAAGATGATC GTTGCCGGCT TCTCGGCCTA CTCGCAGGTT
CTGGACTTCG CCCGCTTCCG CGCCATCGCC GACAAGGTCG GTGCCTACCT GTTCGTCGAC
ATGGCCCACG TTGCCGGCCT GGTTGCCGCT GGCGTGTACC CGAACCCGGT GCCGTTCGCC
GACGTGGTCA CCACCACCAC CCACAAGACC CTGCGCGGCC CACGCGGCGG CCTGATCCTG
GCCCGTGCCA ACGCCGACAT CGAGAAGAAG CTGAACTCCG CTGTCTTCCC AGGCGCCCAA
GGCGGCCCGC TGGAGCACGT AATCGCCGCC AAGGCCATCT GCTTCAAAGA AGCCCTGCAA
CCTGAGTTCA AGGCTTACCA GCAGCAAGTC GTGAAGAACG CCCAGGCCAT GGCCAGCGTG
TTCATCGAGC GTGGTTTCGA CGTGGTTTCC GGTGGCACCC AGAACCACCT GTTCCTGCTG
TCGCTGATCA AGCAGGAAAT TTCCGGTAAG GACGCTGACG CTGCCCTGGG CAAAGCCTTC
ATCACCGTGA ACAAGAACTC GGTCCCGAAC GACCCACGTT CGCCGTTCGT CACCTCGGGC
CTGCGTTTCG GCACCCCAGC CGTTACCACC CGTGGTTTCA AGGAAGCCGA GTGCAAGGAA
CTGGCTGGCT GGATCTGCGA CATCCTGGCT GACCTGAACA ACGAAGCGGT GATCGACGCC
GTACGTGAGA AGGTCAAGGC CATCTGCAAG AAGCTGCCGG TTTACGGCAA CTGA
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| Protein sequence | MFSRDLTIAK YDAELFEAMQ QEALRQEEHI ELIASENYTS PAVMEAQGSV LTNKYAEGYP
GKRYYGGCEY VDIVEQLAID RAKELFGADY ANVQPHAGSQ ANAAVYLALL SAGDTILGMS
LAHGGHLTHG ASVSSSGKLY NAIQYGIDGN GLIDYDEVER LAVEHKPKMI VAGFSAYSQV
LDFARFRAIA DKVGAYLFVD MAHVAGLVAA GVYPNPVPFA DVVTTTTHKT LRGPRGGLIL
ARANADIEKK LNSAVFPGAQ GGPLEHVIAA KAICFKEALQ PEFKAYQQQV VKNAQAMASV
FIERGFDVVS GGTQNHLFLL SLIKQEISGK DADAALGKAF ITVNKNSVPN DPRSPFVTSG
LRFGTPAVTT RGFKEAECKE LAGWICDILA DLNNEAVIDA VREKVKAICK KLPVYGN
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