Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0694 |
Symbol | |
ID | 5868451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 791778 |
End bp | 792734 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545792 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001666940 |
Protein GI | 167031709 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.957328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTT CCAACGAAAC GCCCATCGCC GCAGCCATCG TCGAACAGGC CAGCCATTGG TTAATGCTGC AATGGAGCGG CGAGCTGGAC AAGGCACAAC AGCGTCGCTT TGCTGAGTGG CGAAATGCGG ACCCGGAACA TGCCCGTGCG TGGCAGCGCC TGGAGCACCT GCAACATACC CTGAGCGGTG TGTCAGCGGA TACCGCGCTG GCCGTGCTAC GGGAGCAGCC TGACGCGCGC CGTCGACAGA CGCTGAAACT GCTCAGCGCC CTGCTTTTGG CTGGCGGCAG CGGTTACATC GTCCAATCGC AATTGCCTTG GCGCGAGGCC ATGGCAGATC TGCGCAGCGG CACGGGTGAG CGCCTGCAGC GCACGTTGGC CGATGGCAGC CGGCTTGGCT TGAACAGCGG TAGCGCGGTT GATATCCAGT TCAGCGCAAG CGAGCGCCGC ATTCGCCTGC TCGCTGGGGA GTTGCTGCTC GACAGCGGCC ATGACCCCGC GCAACGCCCA CTGATCGTGG ACACCATAGC CGGGGATGTC CTGGCACTCG GCACGCGCTT TTCCGTGTAC CAACATGACG ATAAATGCCA GGTCGACCTG TTTGAGGGCG AACTGGAACT GCGCCCGCGT CAGGCTCGCG CCATACGCCT GCAAGCCGGA CAAGGTTGCT GGTTTTCCAC CACCCAGATC GGTGACATCG CACCCGCGAA TCTCAACGCC ATCGCCTGGC ACGATGGTCG GCTGATCGCC GAGCGCATGC CGCTCGGGCA GTTCACCGCA GAACTGGCTC GCCATCGGGC CGGTATGCTG CGCTGCGACC CTGCCGTCGC CGCCCTGCCG CTAACCGGCG TTTTTCCGCT GGCAGACACC GACCGCGTAC TTACAGCGCT AGAGCAATCC CTACCGGTAA AAGTACACCG CCTGACACGT TATTGGACCA CCATCAGTCC CGCATGA
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Protein sequence | MKTSNETPIA AAIVEQASHW LMLQWSGELD KAQQRRFAEW RNADPEHARA WQRLEHLQHT LSGVSADTAL AVLREQPDAR RRQTLKLLSA LLLAGGSGYI VQSQLPWREA MADLRSGTGE RLQRTLADGS RLGLNSGSAV DIQFSASERR IRLLAGELLL DSGHDPAQRP LIVDTIAGDV LALGTRFSVY QHDDKCQVDL FEGELELRPR QARAIRLQAG QGCWFSTTQI GDIAPANLNA IAWHDGRLIA ERMPLGQFTA ELARHRAGML RCDPAVAALP LTGVFPLADT DRVLTALEQS LPVKVHRLTR YWTTISPA
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