Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0693 |
Symbol | |
ID | 5868450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 789205 |
End bp | 791649 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545791 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001666939 |
Protein GI | 167031708 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTATC TGCCCACAAC ACCCCGTTCT CGATTGAGCC TTGCGGTTCG TCACACCCTG TTTGCCGGCT TGCTTTGCAG CAGCCCCCTT CTACTGGCGC TGCCCGCAAC ATCGGCTGGC GCCAGCGAGC AATCACGCAG TTACGCCATC CCCGCCGGCG GCCTGGATCA GGCGTTGAAC CGCTTCGCGA GCGAGGCCGG CATCCTGCTT TCTGCCGACG CCCAGCTGAC CGCCGGCAAG CGCAGCGCTG GGCTCAATGG CAGCTATGAC ATTGACGAGG GCCTGGCCCA GCTGCTGGCG GGTACTGGCC TTCGGGCACT CAATAGCGGT GGCAACTATA CGGTGGAGGT CGTTGCCGAC AGTGGTGGCG CCCTGGAGTT GAGTGCAACC AACATCATCA GCAACCAGCT GGGCACCGTC ACCGAAGGCA CGGGGTCCTA CACGCCCGGC ACCATCGCCA CGGCCACCCG CCTGGTGCTG AAACCCAGGG AAACCCCGCA GTCGATCAGC GTGGTCACTC GTCAGCACAT GGATGACTTT GCCCTCAACA CTGTCGACGC AGTCATGCGC CACACCCCAG GTATTACCGT GTCGGCTTAC GACACTGATC GCACCAACTA CTATTCGCGC GGTTTCTCGA TCAACAACTT CCAGTACGAC GGCATCCCCT CCGCCGTGCG CAACGTCGCC TACTCGGCAG GCAACACCCT GAGCGACATG GCGATCTACG ACCGTATCGA AGTACTCAAG GGCGCATCCG GCCTACTCAG CGGCGCAGGC TCGCTGGGCG GCACCATCAA CCTGGTACGC AAAAAGCCCA CCGCCGACTT CCAGGGCCAC GCCACCCTGG GTGCAGGCTC GTGGGACAAC TACCGCAGCG AACTGGATGT CAGCGGCCCG CTGACCGAAA CCGGCAACGT TCGCGGCCGG GCCGTGGCCG CCTATCAGGA CAAGCATTCG TTCATCGACC GCTACTCGAG CCAGAACTCG GTGTTCTACG GCATCCTCGA GTTCGACCTG TCACCTGACA CGCTGCTGAC GGTAGGCGCC GACTACCAGG ACAACGACCC CAAGGGTTCC ACCTGGTCTG GCAGCTTCCC GCTGCTCAAT TCCAAGGGCG AGCGCAACGA CGCCAAGCGC TCGTTCAGCA ACTCGACCGA CTGGAGCAGC TGGCAGCAAT ACACCCGCAC GGTGTTCGCC ACCCTGGAAC ACGACCTGGG TGACGGCTGG GTGACCAAGC TGCAACTGGA CCACAAGTAC AACGGCTACG ATGCGCAAAT GGGCGCCATC CAATTCGACC AGCCGCAGCC CGACGGCAGC GCTGAAATCA ACGCACAACG CTACAAGGGC GACACCACAA GCGACTCGGC TGACCTTTAC GTGAGCGGCC CGTTCAGCAT GCTCGGCCGC GAGCATGACC TGGTACTGGG CGGCTCGATC AGCAAGGCCC ACTGGAGCGG CAAGGGTTAC TGGGACGAAA CCTTCTCGGT GCCGAACCGG GTGGACTACA ACAACTGGCA CGGCAACCTG CCCAAGCCCG ACTGGGGTCC GGTGTCGCAG CGCACCGACG ATGTCATCCG CCAGACCGGC GTGTACCTCA CCACCCGCCT GAACGTGACC GACGACCTGA AAGTGCTGCT GGGTGGCCGC GTCGTCAACT ACAGCCTGAC CGGCCTGACC CCGACCTACA CCGAGTCCGG GCGCTTCATT CCCTATGCCG GCGCCATCTA CGACCTGAAC GAAAATTTCT CGGTCTACGC CAGCTACACC GACGTGTTCA TGCCCCAGGA AAACTACAAC CGCGACCGCG ACAACAAACT GATCGAGCCG GATGAAGGCG AAAACTACGA AATCGGCATC AAGAGCGAGT TTTTCGACGG CCGCCTGAAC GCCAGCCTGG CCTACTTCGA GGTCAAGGAA AGCAACCGCT CGGTGCCGGA TGACGCCTAC AACAACCAGA CCCCTACCCC GCCCAACTAC GCGTTCAAGG GCAGCAAGGC GACCACCAAA GGCTACGAGC TGGAAGTGTC CGGCGAGCTG GCCCCGGGCT GGCAGGTGCA GGGCGGCTAC ACCCACAAGG TGGTGCGCGA CAGCAACGAC GTGAAGCTCT CCACCTTCGA GCCCGAAGAC CAGCTAAGCC TCTACACCAC CTACAAACTC ACCGGTGACC TGGACAAGAT CACCGTTGGC GGTGGTGCGC GTTGGCAGAA CAAGGCCTGG CAGCAGATCT GGAACAGCCC CAAGGGCGTG AACGAGGACG TTACGCAAGA ATCCTACTGG GTGGTGGACC TGATGACCCG CTACCAGATC ACCCCGAACC TGTCGGCGAC CGTCAACCTC AACAACATCT TCGACAAGTA TTACTACACC AACGTCGGCT TCTATAACTC GGCCATCTAC GGCGAACCGC GCAACGTCAT GGTCACTACT CGCTGGGACT TCTGA
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Protein sequence | MPYLPTTPRS RLSLAVRHTL FAGLLCSSPL LLALPATSAG ASEQSRSYAI PAGGLDQALN RFASEAGILL SADAQLTAGK RSAGLNGSYD IDEGLAQLLA GTGLRALNSG GNYTVEVVAD SGGALELSAT NIISNQLGTV TEGTGSYTPG TIATATRLVL KPRETPQSIS VVTRQHMDDF ALNTVDAVMR HTPGITVSAY DTDRTNYYSR GFSINNFQYD GIPSAVRNVA YSAGNTLSDM AIYDRIEVLK GASGLLSGAG SLGGTINLVR KKPTADFQGH ATLGAGSWDN YRSELDVSGP LTETGNVRGR AVAAYQDKHS FIDRYSSQNS VFYGILEFDL SPDTLLTVGA DYQDNDPKGS TWSGSFPLLN SKGERNDAKR SFSNSTDWSS WQQYTRTVFA TLEHDLGDGW VTKLQLDHKY NGYDAQMGAI QFDQPQPDGS AEINAQRYKG DTTSDSADLY VSGPFSMLGR EHDLVLGGSI SKAHWSGKGY WDETFSVPNR VDYNNWHGNL PKPDWGPVSQ RTDDVIRQTG VYLTTRLNVT DDLKVLLGGR VVNYSLTGLT PTYTESGRFI PYAGAIYDLN ENFSVYASYT DVFMPQENYN RDRDNKLIEP DEGENYEIGI KSEFFDGRLN ASLAYFEVKE SNRSVPDDAY NNQTPTPPNY AFKGSKATTK GYELEVSGEL APGWQVQGGY THKVVRDSND VKLSTFEPED QLSLYTTYKL TGDLDKITVG GGARWQNKAW QQIWNSPKGV NEDVTQESYW VVDLMTRYQI TPNLSATVNL NNIFDKYYYT NVGFYNSAIY GEPRNVMVTT RWDF
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