Gene PputGB1_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0693 
Symbol 
ID5868450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp789205 
End bp791649 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content62% 
IMG OID641545791 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001666939 
Protein GI167031708 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTATC TGCCCACAAC ACCCCGTTCT CGATTGAGCC TTGCGGTTCG TCACACCCTG 
TTTGCCGGCT TGCTTTGCAG CAGCCCCCTT CTACTGGCGC TGCCCGCAAC ATCGGCTGGC
GCCAGCGAGC AATCACGCAG TTACGCCATC CCCGCCGGCG GCCTGGATCA GGCGTTGAAC
CGCTTCGCGA GCGAGGCCGG CATCCTGCTT TCTGCCGACG CCCAGCTGAC CGCCGGCAAG
CGCAGCGCTG GGCTCAATGG CAGCTATGAC ATTGACGAGG GCCTGGCCCA GCTGCTGGCG
GGTACTGGCC TTCGGGCACT CAATAGCGGT GGCAACTATA CGGTGGAGGT CGTTGCCGAC
AGTGGTGGCG CCCTGGAGTT GAGTGCAACC AACATCATCA GCAACCAGCT GGGCACCGTC
ACCGAAGGCA CGGGGTCCTA CACGCCCGGC ACCATCGCCA CGGCCACCCG CCTGGTGCTG
AAACCCAGGG AAACCCCGCA GTCGATCAGC GTGGTCACTC GTCAGCACAT GGATGACTTT
GCCCTCAACA CTGTCGACGC AGTCATGCGC CACACCCCAG GTATTACCGT GTCGGCTTAC
GACACTGATC GCACCAACTA CTATTCGCGC GGTTTCTCGA TCAACAACTT CCAGTACGAC
GGCATCCCCT CCGCCGTGCG CAACGTCGCC TACTCGGCAG GCAACACCCT GAGCGACATG
GCGATCTACG ACCGTATCGA AGTACTCAAG GGCGCATCCG GCCTACTCAG CGGCGCAGGC
TCGCTGGGCG GCACCATCAA CCTGGTACGC AAAAAGCCCA CCGCCGACTT CCAGGGCCAC
GCCACCCTGG GTGCAGGCTC GTGGGACAAC TACCGCAGCG AACTGGATGT CAGCGGCCCG
CTGACCGAAA CCGGCAACGT TCGCGGCCGG GCCGTGGCCG CCTATCAGGA CAAGCATTCG
TTCATCGACC GCTACTCGAG CCAGAACTCG GTGTTCTACG GCATCCTCGA GTTCGACCTG
TCACCTGACA CGCTGCTGAC GGTAGGCGCC GACTACCAGG ACAACGACCC CAAGGGTTCC
ACCTGGTCTG GCAGCTTCCC GCTGCTCAAT TCCAAGGGCG AGCGCAACGA CGCCAAGCGC
TCGTTCAGCA ACTCGACCGA CTGGAGCAGC TGGCAGCAAT ACACCCGCAC GGTGTTCGCC
ACCCTGGAAC ACGACCTGGG TGACGGCTGG GTGACCAAGC TGCAACTGGA CCACAAGTAC
AACGGCTACG ATGCGCAAAT GGGCGCCATC CAATTCGACC AGCCGCAGCC CGACGGCAGC
GCTGAAATCA ACGCACAACG CTACAAGGGC GACACCACAA GCGACTCGGC TGACCTTTAC
GTGAGCGGCC CGTTCAGCAT GCTCGGCCGC GAGCATGACC TGGTACTGGG CGGCTCGATC
AGCAAGGCCC ACTGGAGCGG CAAGGGTTAC TGGGACGAAA CCTTCTCGGT GCCGAACCGG
GTGGACTACA ACAACTGGCA CGGCAACCTG CCCAAGCCCG ACTGGGGTCC GGTGTCGCAG
CGCACCGACG ATGTCATCCG CCAGACCGGC GTGTACCTCA CCACCCGCCT GAACGTGACC
GACGACCTGA AAGTGCTGCT GGGTGGCCGC GTCGTCAACT ACAGCCTGAC CGGCCTGACC
CCGACCTACA CCGAGTCCGG GCGCTTCATT CCCTATGCCG GCGCCATCTA CGACCTGAAC
GAAAATTTCT CGGTCTACGC CAGCTACACC GACGTGTTCA TGCCCCAGGA AAACTACAAC
CGCGACCGCG ACAACAAACT GATCGAGCCG GATGAAGGCG AAAACTACGA AATCGGCATC
AAGAGCGAGT TTTTCGACGG CCGCCTGAAC GCCAGCCTGG CCTACTTCGA GGTCAAGGAA
AGCAACCGCT CGGTGCCGGA TGACGCCTAC AACAACCAGA CCCCTACCCC GCCCAACTAC
GCGTTCAAGG GCAGCAAGGC GACCACCAAA GGCTACGAGC TGGAAGTGTC CGGCGAGCTG
GCCCCGGGCT GGCAGGTGCA GGGCGGCTAC ACCCACAAGG TGGTGCGCGA CAGCAACGAC
GTGAAGCTCT CCACCTTCGA GCCCGAAGAC CAGCTAAGCC TCTACACCAC CTACAAACTC
ACCGGTGACC TGGACAAGAT CACCGTTGGC GGTGGTGCGC GTTGGCAGAA CAAGGCCTGG
CAGCAGATCT GGAACAGCCC CAAGGGCGTG AACGAGGACG TTACGCAAGA ATCCTACTGG
GTGGTGGACC TGATGACCCG CTACCAGATC ACCCCGAACC TGTCGGCGAC CGTCAACCTC
AACAACATCT TCGACAAGTA TTACTACACC AACGTCGGCT TCTATAACTC GGCCATCTAC
GGCGAACCGC GCAACGTCAT GGTCACTACT CGCTGGGACT TCTGA
 
Protein sequence
MPYLPTTPRS RLSLAVRHTL FAGLLCSSPL LLALPATSAG ASEQSRSYAI PAGGLDQALN 
RFASEAGILL SADAQLTAGK RSAGLNGSYD IDEGLAQLLA GTGLRALNSG GNYTVEVVAD
SGGALELSAT NIISNQLGTV TEGTGSYTPG TIATATRLVL KPRETPQSIS VVTRQHMDDF
ALNTVDAVMR HTPGITVSAY DTDRTNYYSR GFSINNFQYD GIPSAVRNVA YSAGNTLSDM
AIYDRIEVLK GASGLLSGAG SLGGTINLVR KKPTADFQGH ATLGAGSWDN YRSELDVSGP
LTETGNVRGR AVAAYQDKHS FIDRYSSQNS VFYGILEFDL SPDTLLTVGA DYQDNDPKGS
TWSGSFPLLN SKGERNDAKR SFSNSTDWSS WQQYTRTVFA TLEHDLGDGW VTKLQLDHKY
NGYDAQMGAI QFDQPQPDGS AEINAQRYKG DTTSDSADLY VSGPFSMLGR EHDLVLGGSI
SKAHWSGKGY WDETFSVPNR VDYNNWHGNL PKPDWGPVSQ RTDDVIRQTG VYLTTRLNVT
DDLKVLLGGR VVNYSLTGLT PTYTESGRFI PYAGAIYDLN ENFSVYASYT DVFMPQENYN
RDRDNKLIEP DEGENYEIGI KSEFFDGRLN ASLAYFEVKE SNRSVPDDAY NNQTPTPPNY
AFKGSKATTK GYELEVSGEL APGWQVQGGY THKVVRDSND VKLSTFEPED QLSLYTTYKL
TGDLDKITVG GGARWQNKAW QQIWNSPKGV NEDVTQESYW VVDLMTRYQI TPNLSATVNL
NNIFDKYYYT NVGFYNSAIY GEPRNVMVTT RWDF