Gene PputGB1_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0683 
Symbol 
ID5868440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp776374 
End bp776583 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content56% 
IMG OID641545781 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_001666929 
Protein GI167031698 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGTC AACCTATCTC ACCTCTACTG CTGCGCTTGC CTGGCGTCTG TGCTCTGGTA 
GGACTTAGCA AATCTCAGAT CTATCGCCTG ATCCGGGCTG GAGAGTTTCC TGCCGGTATT
TCCCTTGGGG CGAACTCTGT AGCTTGGCCC GCCGAGCAAG TCAGCGCCTG GGTGGCCGAG
AAGATCAATG CAGCTACTTC TCCGCAATGA
 
Protein sequence
MASQPISPLL LRLPGVCALV GLSKSQIYRL IRAGEFPAGI SLGANSVAWP AEQVSAWVAE 
KINAATSPQ