| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0670 |
|---|
| Symbol | |
|---|
| ID | 5868421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 762762 |
|---|
| End bp | 763502 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641545763 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001666917 |
|---|
| Protein GI | 167031686 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGCC TGGCGCAGTC GCTGCTGATC CCCGACTGGC CGGCCCCGGC CTCGGTTCGC
GCCTGTGTCA CCACCCGTCA GGGCGGCGTC AGCCTGCCGC CTTATGAAAC CTTCAACCTT
GGCGACCACG TGGGGGACGA CCCTGCCGCC GTCGCCGAGA ACCGCCGTCG CCTCAGCGCC
CCGTTCGGCA TTCAGCCGGC CTGGCTCAAG CAGGTACATG GCCTGGTGGT GGCGGATGCC
GACCCAGCCG TGGTGGCCGA GGCCGACGCC AGCTGGACCG ACCAGCCTGG CATTGCCTGC
ACCGTAATGA CTGCCGATTG CCTGCCTGCG CTGTTCTGTG ACCGCGCGGG CACCCGTGTG
GCCGCGGCAC ATGCAGGCTG GCGTGGGCTG GCTGGCGGTG TGCTGGAAGC CACCTTGGAC
CGCCTGGCAC TGCCGGCGGA AGAGGTGCTG GTGTGGCTGG GGCCGGCCAT TGGCCCGCAG
GCGTTCGAGG TAGGGCTGGA AGTGCGCGAT GCCTTCACTG CCGTGCATCC AGAAGCCGCC
CGGGCGTTTG TCGAGGGCGA GCGGCCGGGC AAGCTGATGG CCGACATCTA TGAGCTGGCG
CGTATTCGCC TGGCTGCTCG TGGCGTCACT GCCGTTTATG GCGGTGGCTT TTGCACGGTC
AGCGATCAGC GGTTCTTCTC CTATCGCCGT ACCCCGCAGG GTGGGCGGTT TGCATCCTTG
GTGTGGCTGG AGCCTCGCTA A
|
|---|
| Protein sequence | MSGLAQSLLI PDWPAPASVR ACVTTRQGGV SLPPYETFNL GDHVGDDPAA VAENRRRLSA
PFGIQPAWLK QVHGLVVADA DPAVVAEADA SWTDQPGIAC TVMTADCLPA LFCDRAGTRV
AAAHAGWRGL AGGVLEATLD RLALPAEEVL VWLGPAIGPQ AFEVGLEVRD AFTAVHPEAA
RAFVEGERPG KLMADIYELA RIRLAARGVT AVYGGGFCTV SDQRFFSYRR TPQGGRFASL
VWLEPR
|
|---|
| |