Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0665 |
Symbol | |
ID | 5868416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 758069 |
End bp | 759271 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545758 |
Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_001666912 |
Protein GI | 167031681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGAC GTACCCTGCT CAAGGCAGGC CTTGCCCTGG GTGCCTTAGG TAGCCTCCCC TTGGGGGCGC ACCGGGCATT CGCCGACCAA CCGTTGACCT TCTATGGGCT CAAGTCCATG TCGGGCGCCT TCGCCAGCTA CGGCAAGTAC GCCGACATGG GCTCGCGCCT GGCCATTGCC GAATACCCCC AGCTGCTCGG CCACCCGCTC AAGTACAAGG TCATCGACAC CGAAGGCAAC GCCGGCAAGG CGGTGCGCAA GGTACAGGAA GCCATCGGCC AGGATGGCGC ACGCTTCTTC CAGGGCTGCA CCCTGTCCTC CTCGGCACTG GCGGTGTCGA AGGAAATCCA CAAAGCCGGC GGCGTGTTCA TGACGCCTGT GGGCGCCGAC GAAATCACCG GCAAAGACTG CAACGCCTCG ACCTTCCGCT GGTCGGTGCC CACCTACGGC GCCATTCGCG AAACCTTGGT GCCGATGATC CGCCAACTAC CACAGGCCAA GCGCTGGTAC ACCATCACCC CGCAATACGT GTTCGGTGAC GCGTTGCTGG ACAACGCCCG CAAGGTGTTC GCCGAGCTTG GGGTGGAACA CATCGGTAAC AGCTACCACT CGCTGCAGGA ACAGGAATTC TCTGGCTACC TGACCAACGC CATCGCCGCA AAACCCGACG TGCTGGTGTT GCTCAACTTC GGCAGCCAGG CCTCCAACGC CCTGCGCCAG GCGGTCAACT TCGGCATCAA GGACCGCATG AAAGTGCTGA TGGTGTGGTC TGCCGGCCTC GACCAGTTCC AGGAGCTGGG CAGCGACGTG CTCGAGGGCG TGTACCTGGG CGCGCAGTAC TGGCACCAGG TCGATACCCC GCTGAACAAG CAGTTGGTCG CCGCCACCCG CAAGGCTTAC GGCATCAACC CCAACTACCC ACTGGCCGCT GACTACATCG GCACCAAGGT CATGCTCGAG GCCATCGTCA AGGCTGGCAG CCTGGACGGT GCCGCCGTGT CTGCGGCATT GCAGGGCATG CGCTTCCAAG GCCCGACCGG CGAAGAACTG ATCCGCCCGG GTGACCATCA GGTGCTCAAG GATTACTACC TGCTGCGCGG CAAGCCCCAG GGGCAGATGC GCGACGAGGA CGACCTGGCC GAAGTCATCA GTTCGGGCCG CTCGTTCGTC GAGGTCGACC ACACCGGTTG CGCCCTGGCC TGA
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Protein sequence | MQRRTLLKAG LALGALGSLP LGAHRAFADQ PLTFYGLKSM SGAFASYGKY ADMGSRLAIA EYPQLLGHPL KYKVIDTEGN AGKAVRKVQE AIGQDGARFF QGCTLSSSAL AVSKEIHKAG GVFMTPVGAD EITGKDCNAS TFRWSVPTYG AIRETLVPMI RQLPQAKRWY TITPQYVFGD ALLDNARKVF AELGVEHIGN SYHSLQEQEF SGYLTNAIAA KPDVLVLLNF GSQASNALRQ AVNFGIKDRM KVLMVWSAGL DQFQELGSDV LEGVYLGAQY WHQVDTPLNK QLVAATRKAY GINPNYPLAA DYIGTKVMLE AIVKAGSLDG AAVSAALQGM RFQGPTGEEL IRPGDHQVLK DYYLLRGKPQ GQMRDEDDLA EVISSGRSFV EVDHTGCALA
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