Gene PputGB1_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0665 
Symbol 
ID5868416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp758069 
End bp759271 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID641545758 
Productbranched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_001666912 
Protein GI167031681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAC GTACCCTGCT CAAGGCAGGC CTTGCCCTGG GTGCCTTAGG TAGCCTCCCC 
TTGGGGGCGC ACCGGGCATT CGCCGACCAA CCGTTGACCT TCTATGGGCT CAAGTCCATG
TCGGGCGCCT TCGCCAGCTA CGGCAAGTAC GCCGACATGG GCTCGCGCCT GGCCATTGCC
GAATACCCCC AGCTGCTCGG CCACCCGCTC AAGTACAAGG TCATCGACAC CGAAGGCAAC
GCCGGCAAGG CGGTGCGCAA GGTACAGGAA GCCATCGGCC AGGATGGCGC ACGCTTCTTC
CAGGGCTGCA CCCTGTCCTC CTCGGCACTG GCGGTGTCGA AGGAAATCCA CAAAGCCGGC
GGCGTGTTCA TGACGCCTGT GGGCGCCGAC GAAATCACCG GCAAAGACTG CAACGCCTCG
ACCTTCCGCT GGTCGGTGCC CACCTACGGC GCCATTCGCG AAACCTTGGT GCCGATGATC
CGCCAACTAC CACAGGCCAA GCGCTGGTAC ACCATCACCC CGCAATACGT GTTCGGTGAC
GCGTTGCTGG ACAACGCCCG CAAGGTGTTC GCCGAGCTTG GGGTGGAACA CATCGGTAAC
AGCTACCACT CGCTGCAGGA ACAGGAATTC TCTGGCTACC TGACCAACGC CATCGCCGCA
AAACCCGACG TGCTGGTGTT GCTCAACTTC GGCAGCCAGG CCTCCAACGC CCTGCGCCAG
GCGGTCAACT TCGGCATCAA GGACCGCATG AAAGTGCTGA TGGTGTGGTC TGCCGGCCTC
GACCAGTTCC AGGAGCTGGG CAGCGACGTG CTCGAGGGCG TGTACCTGGG CGCGCAGTAC
TGGCACCAGG TCGATACCCC GCTGAACAAG CAGTTGGTCG CCGCCACCCG CAAGGCTTAC
GGCATCAACC CCAACTACCC ACTGGCCGCT GACTACATCG GCACCAAGGT CATGCTCGAG
GCCATCGTCA AGGCTGGCAG CCTGGACGGT GCCGCCGTGT CTGCGGCATT GCAGGGCATG
CGCTTCCAAG GCCCGACCGG CGAAGAACTG ATCCGCCCGG GTGACCATCA GGTGCTCAAG
GATTACTACC TGCTGCGCGG CAAGCCCCAG GGGCAGATGC GCGACGAGGA CGACCTGGCC
GAAGTCATCA GTTCGGGCCG CTCGTTCGTC GAGGTCGACC ACACCGGTTG CGCCCTGGCC
TGA
 
Protein sequence
MQRRTLLKAG LALGALGSLP LGAHRAFADQ PLTFYGLKSM SGAFASYGKY ADMGSRLAIA 
EYPQLLGHPL KYKVIDTEGN AGKAVRKVQE AIGQDGARFF QGCTLSSSAL AVSKEIHKAG
GVFMTPVGAD EITGKDCNAS TFRWSVPTYG AIRETLVPMI RQLPQAKRWY TITPQYVFGD
ALLDNARKVF AELGVEHIGN SYHSLQEQEF SGYLTNAIAA KPDVLVLLNF GSQASNALRQ
AVNFGIKDRM KVLMVWSAGL DQFQELGSDV LEGVYLGAQY WHQVDTPLNK QLVAATRKAY
GINPNYPLAA DYIGTKVMLE AIVKAGSLDG AAVSAALQGM RFQGPTGEEL IRPGDHQVLK
DYYLLRGKPQ GQMRDEDDLA EVISSGRSFV EVDHTGCALA