Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0664 |
Symbol | |
ID | 5868415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 757143 |
End bp | 758003 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545757 |
Product | inner-membrane translocator |
Protein accession | YP_001666911 |
Protein GI | 167031680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT TGTACCTGTT CCAACTGCTC AACGGCCTGG GCCTGGGGAT GATCTACTTC CTCATCGCCG TGGGCCTGAC GATCATTTTC GGCCTGCTCA ACTTCGTCAA CTTCGCCCAC GGTGCGTTCT TCTTGCTGGG CGCCTACCTG TGCTACACCG CCGTAGCGAT AACCGGCAAC TTCTGGCTGG CGCTGCTGAT TGCGCCGCTG GTAGTGGCCG CACTGGCGTG GGCCGTCGAG CGCCTGTTGA TCAAGCGCAT CTACCACCTG CCGCACACCT TCCAGATCCT CGTCACCCTC GGCATCGCAC TGATCATCCA GGAAGCCTCG GTGCTGATCT GGGGCCCGGT GGGCAAGAAC ATTGCCGTAC CGCCGGAGCT GCGCGGCGTG CTGATCCTCG GTGACTTCAT CTACCCCTAC TACCGCCTGT TCCTGATCGG CTTCGCCGCG CTGATCGGCG TTGGCTTGTG GTTGCTGCTG GAGCGCACCC GCTTCGGCGC ACTGGTGCGC GCGGGTAGCG AAAGCACCGA AACCGTATCG CTGCTGGGCA CCAATATCTT TCGCCTGTTC TCCCTGACCT TCGCCCTGGG CGTGGGCCTG GCCGGGGTGG CGGGTGTGCT GTTCGCACCA CTACGCGGCG CCCAGCCTTT CGTCGGCCCG GAGATCCTCG GCATTGCCTT CGTGGTGGTG GTGATCGGCG GCATGGGCTC GTTCGGCGGT GCGCTGGTTG GCGGCCTGCT GGTGGGTGTG GTGCAAAGCA TGATGACCAG CCTCTGGCCG CAAGGCGCCA GCCTGATGAT CTACGGCGCC ATGGCCGCAG TGATCCTGGT CCGTCCCTAT GGCCTGTTTG GGAGAGCCTG A
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Protein sequence | MLDLYLFQLL NGLGLGMIYF LIAVGLTIIF GLLNFVNFAH GAFFLLGAYL CYTAVAITGN FWLALLIAPL VVAALAWAVE RLLIKRIYHL PHTFQILVTL GIALIIQEAS VLIWGPVGKN IAVPPELRGV LILGDFIYPY YRLFLIGFAA LIGVGLWLLL ERTRFGALVR AGSESTETVS LLGTNIFRLF SLTFALGVGL AGVAGVLFAP LRGAQPFVGP EILGIAFVVV VIGGMGSFGG ALVGGLLVGV VQSMMTSLWP QGASLMIYGA MAAVILVRPY GLFGRA
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