| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0657 |
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| Symbol | |
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| ID | 5868408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 750318 |
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| End bp | 750707 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641545750 |
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| Product | type IV pili biogenesis protein PilE |
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| Protein accession | YP_001666904 |
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| Protein GI | 167031673 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.96879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAG GCTTGAGCCT GATCGAGTTG TTGATTGTGC TGGCCGTGAC CGGCATTCTG
GCAGCCATTG CCTACCCCAG TTACAGCGAC CAGCTTCGGC GAGCCGCGCG CAGCGAAGTG
GTTGGCCTGC TGCATGATGC CGCCCTGCGT CTGGAGCGCC ACCGCGTGCG CACCGGCGAG
TATGCCGAGG GCGACCCGGC CTTGCCCGAC GGTACCCGCT ACTACAGCCT GCAGGCCCAG
CGCGGCAGCG ACACCTTCAC GCTGCACGCC CGGCGGCTGC CGAATGGGCT GATGGCACAG
GATGGCTGTG GCGATTTCCA GCTCGACCAG GCTGGCGCGC GCAGCAACCC CGGTGCCGTT
GGTGGCAGCG AGCACTGCTG GGGAAGCTGA
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| Protein sequence | MQQGLSLIEL LIVLAVTGIL AAIAYPSYSD QLRRAARSEV VGLLHDAALR LERHRVRTGE
YAEGDPALPD GTRYYSLQAQ RGSDTFTLHA RRLPNGLMAQ DGCGDFQLDQ AGARSNPGAV
GGSEHCWGS
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