| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0650 |
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| Symbol | lspA |
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| ID | 5868401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 746553 |
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| End bp | 747068 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545743 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001666897 |
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| Protein GI | 167031666 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.177868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAACC CTGCAGCGGG GCGCTTCGGG CGCCTTGCAT GGCTTTGGCT GAGCTTGCTG
GTCCTGGTCC TCGACCAGGC CACCAAGCTG TACTTCAACA ACGCCCTGAC CATGTACCAG
CAGATTGTGG TCATCCCTGA CTACTTCAGC TGGACGTTGG CCTACAACAC CGGTGCCGCG
TTCAGCTTCC TCGCTGATGG CGCTGGCTGG CAGCGCTGGC TGTTCGCCCT GATCGCCGTG
GTGGTCAGTG CCGTGCTGGT GGTATGGCTC AAGCGCCTGG GGCGCAACGA GACCTGGCTG
GCCGTGGCAC TGGCGCTGGT GCTGGGTGGC GCCATCGGCA ACCTGTACGA TCGCATCGTG
CTGGGCCATG TGGTCGACTT CATCCTGGTG CACTGGCAGA ACCGCCACTA CTTCCCGGCC
TTCAACGTGG CCGACAGCGC CATCACCGTT GGTGCGGTGA TGCTGGCGCT GGATATGTTC
AAGAGCAAGA AGTCCGAGGA TCCGGTCCAT GACTGA
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| Protein sequence | MPNPAAGRFG RLAWLWLSLL VLVLDQATKL YFNNALTMYQ QIVVIPDYFS WTLAYNTGAA
FSFLADGAGW QRWLFALIAV VVSAVLVVWL KRLGRNETWL AVALALVLGG AIGNLYDRIV
LGHVVDFILV HWQNRHYFPA FNVADSAITV GAVMLALDMF KSKKSEDPVH D
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