| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0646 |
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| Symbol | rpsT |
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| ID | 5868397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 740596 |
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| End bp | 740874 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641545739 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_001666893 |
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| Protein GI | 167031662 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0571699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCAACA CACCTTCCGC CAAGAAACGT GCAAAACAGG CTGAGAAGCG TCGCAGCCAC
AACGCCAGCC TGCGTTCCAT GGTCCGCACC TACATCAAGA ATGTAGTTAA AGCCATTGAC
GCAAAAGACG CCGAAAAAGC GCAAGCCGCT TACGTTCTGG CTGTACCTGT AATCGACCGT
ATGGCCGACA AAGGTATCAT CCACAAGAAC AAGGCTGCTC GTCACAAAGG CCGTCTGAAT
GGCCACATCA AGGCGCTGAA AGAAGCTGCA GCTGCCTAA
|
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| Protein sequence | MANTPSAKKR AKQAEKRRSH NASLRSMVRT YIKNVVKAID AKDAEKAQAA YVLAVPVIDR
MADKGIIHKN KAARHKGRLN GHIKALKEAA AA
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