Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0644 |
Symbol | |
ID | 5868395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 737526 |
End bp | 738149 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641545737 |
Product | paraquat-inducible protein A |
Protein accession | YP_001666891 |
Protein GI | 167031660 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00578555 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGGCGA TTGATGCAGG CATTCTTGTC TGCAATGAAT GTCATGAACT GAACAAGCAA GTGCAAGACA GCACGTCGCA GACCTGTACA CGCTGCGGCG CCATTGTCCA TGCTCGCCGC CCAAACAGTA TCGTGCGTAC CTGGGCGCTG CTGATTGCCG CGTCGATCTT GTACATCCCG GCCAACCTGC TGCCGATCAT GACTGTGAGT ACACTCGGTC AGGGCAGCCC CGACACGATC ATGTCCGGCG TCATTACCCT GCTCAAGCAC GGCATGGTGC CCATTGCTGC GGTGGTGTTC ATCGCCAGTA TCCTGGTGCC CACGTTCAAG CTGGTGGGCA TTGGCCTGCT GCTGTACTCC GTTCAGCGTC ACCAGCCGCT TTCGGCGCGG CAACGGATAT TGATGTACCG CTTCATCGAA TTCATTGGGC GCTGGTCCAT GCTCGATATC TTCGTCATCG CCATCCTGGT GGCCGTGGTG AATTTCGGCC GAATAGCCAG TGTCGAAGCC AACCTGGGCG CTGTCGCCTT CGCAACTGTG GTGATCCTGA CAATGCTTGC CGCTTTAACT TTCGATCCCC GACTGATTTG GGATAACACG GAGTCGGATG ACGACCATGA GTGA
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Protein sequence | MRAIDAGILV CNECHELNKQ VQDSTSQTCT RCGAIVHARR PNSIVRTWAL LIAASILYIP ANLLPIMTVS TLGQGSPDTI MSGVITLLKH GMVPIAAVVF IASILVPTFK LVGIGLLLYS VQRHQPLSAR QRILMYRFIE FIGRWSMLDI FVIAILVAVV NFGRIASVEA NLGAVAFATV VILTMLAALT FDPRLIWDNT ESDDDHE
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