| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0643 |
|---|
| Symbol | |
|---|
| ID | 5868394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 736880 |
|---|
| End bp | 737539 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641545736 |
|---|
| Product | paraquat-inducible protein A |
|---|
| Protein accession | YP_001666890 |
|---|
| Protein GI | 167031659 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.766224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00309021 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACT CTGTCGAACC TGAAACCTTG GCCCAATTGC CGTTGGACGA GCTTGTCGCC
TGCCACGAAT GCGACCTGCT GCTGCGCAAG CCCGTGCTCC AGCACGGTGA GAAAGCCCAA
TGCCCACGTT GCGGTTACGA GCTTTATGCT CATCGGCACA ACGTGGTCAA CCGTAGCCTG
GCGTTGGTAC TGACCGCGCT GTTGCTGTTC GTGCCTGCCA ATTTTCTACC GATCATGCAG
TTGCACCTGC TTGGCCAGAC CTCGGACGAT ACTGTCTGGA GCGGCGTACT GGGCCTGTAC
AATTCGCAGA TGCGTGGTGT AGCGGTAGTC GTCTTCCTGT GCAGCATGGC CATCCCCTTG
GCAAAACTGC TCTGCCAACT GGCGGTACTG CTGAGTATCC GCTTGAACGT GGGGCGTAAC
TTCGGCCTGT TGTTCTACCG CATCTATCAC CACCTGCGTG ACTGGGGCAT GCTCGAGGTC
TATTTCATGG GGGTGTTGGT GGCTATCGTC AAGCTGGTGG ACCTGGCCGA GTTGACCGTG
GGCCTGGGGC TGTTCTGTTT CATCAGCCTG TTGTTGATCC AGGTATGGCT TGAGGTGGTG
ATGTCACCGC ACCAGATTTG GAGTGCACTT TCGGGGGAGG ACCTGCATGC GGGCGATTGA
|
|---|
| Protein sequence | MPNSVEPETL AQLPLDELVA CHECDLLLRK PVLQHGEKAQ CPRCGYELYA HRHNVVNRSL
ALVLTALLLF VPANFLPIMQ LHLLGQTSDD TVWSGVLGLY NSQMRGVAVV VFLCSMAIPL
AKLLCQLAVL LSIRLNVGRN FGLLFYRIYH HLRDWGMLEV YFMGVLVAIV KLVDLAELTV
GLGLFCFISL LLIQVWLEVV MSPHQIWSAL SGEDLHAGD
|
|---|
| |