| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0637 |
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| Symbol | |
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| ID | 5868383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 724608 |
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| End bp | 725294 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545725 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001666884 |
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| Protein GI | 167031653 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000253756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAACG CAAAAAACGC ACTTATCATC GGCGCCTCGC GGGGGCTTGG CCTGGGCCTG
GTACAACGCC TGCACGAAGA CGGCTGGAAC ATCACCGCCA CCGTCCGCAA CCCGCAGCAG
CCAGGTGCCC TGGCGGACGT GCCCGGCGTG CACATCGAGC AGCTGGAGAT GAACGACACT
GCCCAGCTCG ACGGCCTGAA GCTACGCCTT CAAGGCCAGG CATTCGACCT GGTGTTCATC
AACGCAGGTG TCATGGGCCC GTTGCCGCAA GACTTGGAGA CGGTACAGAC CAAAGACATC
GGCGACCTGT TCATGACCAA CGCCGTGGCG CCGATCCGCG TGGCACGCCG GCTGGTAGGC
CAGGTACGCG AGGGCAGCGG TGTTCTGGCG TTCATGAGCT CTATTCTGGG CAGCGTGACC
ATACCCGACG GCGGTGAAAT CTGCCTGTAC AAAGCCAGCA AGGCAGCACT GAACTCGATG
ATCAACAGCT TTGTTGTCGA GCAGCAGCGC CCCGACCTGT GCGTACTGGC CATGCACCCG
GGCTGGGTGA AAACCGACAT GGGCGGCGAA AACGCCGAAA TCGATGTGCT CACCAGCACC
CGTGGCATGC TCGAACAGAT CAAGGCGCAA AGTGGCAACG GCGGCCTGCG CTTCATCAAC
TACAAAGGCG AACCCTTGGT CTGGTGA
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| Protein sequence | MANAKNALII GASRGLGLGL VQRLHEDGWN ITATVRNPQQ PGALADVPGV HIEQLEMNDT
AQLDGLKLRL QGQAFDLVFI NAGVMGPLPQ DLETVQTKDI GDLFMTNAVA PIRVARRLVG
QVREGSGVLA FMSSILGSVT IPDGGEICLY KASKAALNSM INSFVVEQQR PDLCVLAMHP
GWVKTDMGGE NAEIDVLTST RGMLEQIKAQ SGNGGLRFIN YKGEPLVW
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