| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0628 |
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| Symbol | |
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| ID | 5868374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 714368 |
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| End bp | 715147 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545716 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001666875 |
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| Protein GI | 167031644 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.458217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000431435 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGATTA TCGGTCATCC CCGCGCTATT CCGGTGCTGG ACCACCTGCC CAGGCCCCTC
TACGCCCGTG CCGAAAGCCT TGGTGCCGGT TCCTGGACCA CCCGCCACCA GCACGACTGG
GTGCAGTTTT CCTACGCGAT CAGCGGCGTA CTCGGCGTGT ACACGCGTGA CGGCAGCTAC
TTTGCCCCGC CACAGTGGGG GGTGTGGATC CCTGCCGATG CCGAGCATGA AGTGGTCACT
TCGATGCAAG CCGAGATGCG CAGCCTGTAT GTGCGCCGCG ATGCCTGCCC ATGGGCGCCT
GAGCAATGCC GGGTGCTTGA GGTGACACCA CTGGCACGCG AACTGATCAA GCAGTTTTGC
CTGTTGCCGG CGGATTACCC GGAGGGTGAC AGTGCCGAGG CGCGCTTGGT GGCGGTGCTG
CTCGACCAGT TGCGCACGTT GCCGGAAGTC GGTTTTTCAC TGCCCTTGCC ACGCCACCCT
GGCTTGCTGG CGCTGTGCAA TGGCTTGATC GCCGCGCCGG ACCAGCCGCA GACCTTGCAG
CAATGGGCGC GCGAGCTGGG GTGTTCGGAG AAGACGCTGA TGCGGCTGTT CCAGCGGGAG
ACCGGGTTGA GCTTTCGCAA TTGGCGGCAG CGCATGCGGT TGCTGTCTTC GCTGGCGCTA
CTGGAGGCGG GGGAGAATGT GACCGAGGCG GCGCTGGGGT GTGGGTATGA CTCCACATCG
GCCTACATTG CGGCGTTCAA GCAGTTGTTT GGGGCGACCC CGGGGGAGCT GAAACTTTAG
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| Protein sequence | MPIIGHPRAI PVLDHLPRPL YARAESLGAG SWTTRHQHDW VQFSYAISGV LGVYTRDGSY
FAPPQWGVWI PADAEHEVVT SMQAEMRSLY VRRDACPWAP EQCRVLEVTP LARELIKQFC
LLPADYPEGD SAEARLVAVL LDQLRTLPEV GFSLPLPRHP GLLALCNGLI AAPDQPQTLQ
QWARELGCSE KTLMRLFQRE TGLSFRNWRQ RMRLLSSLAL LEAGENVTEA ALGCGYDSTS
AYIAAFKQLF GATPGELKL
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