| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0626 |
|---|
| Symbol | fabG |
|---|
| ID | 5868372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 711554 |
|---|
| End bp | 712906 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641545714 |
|---|
| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_001666873 |
|---|
| Protein GI | 167031642 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00883968 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC GCTACCTCGG TTTTGCCAAC TCCAATCTCG GCCGTCGCCT CGTGGATGCC
CTTGGCCTGC CACGCCCGGC GCCGCTGGAG CGCTGGCAAG CTGGCCGCCT GCGCCCGGTG
GAAGGCGCCC TGGTATTGGG TGGCGGGCCT CTGGCGAGCC AGGTCGAAGC CATCGCCCCG
TGCCTGACCG ACGAGGTCTA CAGCTTCAAT GCCGACAACC TGCAGGCTGA AGCCTGGGTG
GCCGGCCTGG GGCCGAAAAT CAAGGCTGTG GTGTTCGATG CCAGTCATTT GTCCGACAGC
GATGCACTGA AGCAGTTGCG CGAATTTTTC CAGCCGCTGT TGCGCAGCCT GGCACCGTGT
GCCCATGTAC TGGTGCTTGG CCGTGCACCA GAAGGCCTCG ACAACCCGTT GGCCAGCGTT
GCTCAACGCG CCCTCGAAGG CTTCAGCCGC TCGCTGGCCA AGGAGCTGCG CAACGGCGCG
ACCGCCCAAT TGTTGTATGT CGCCCCCGAT GCCGAGAACC AGCTGGAAGG CGCCCTGCGC
TTCTTTCTCT CGCCCAAGAG TGCCTTCATC TCGGGCCAGG TATTGCGCAT GGGGGCTTGT
GCCAGTCAGG TCGAGGACTG GACCCGCCCA TTGGGGGGCC GCCGCGCTCT GATCACCGGC
GCCGCACGCG GTATCGGCGC TGCCATAGCT GAAACCCTGG CCCGCGATGG CGCCGAGGTG
CTACTGCTCG ATGTGCCCCA AGCCAGCCAA GACCTCGACG CCCTCGCGGC ACGCCTAGGC
GGCAAGGCAC TGCCACTGGA TATCTGCGCC AGCGACGCGG CAGCGCAACT GCTTGCGGCC
CTGCCCGACG GCATCGACAT CGTAGTGCAC AACGCAGGTA TCACCCGCGA CAAGACGCTG
GCCAACATGA CGCCGGAATA CTGGGACGCA GTGCTGGCCG TCAACCTCAA GGCCCCGCAG
TTGCTGACCC AGGCGCTGTA TGACAACGGC GCGCTGGGGG AAAACGCACG CATCACCCTG
CTGGCATCGG TCAGCGGTAT TGCCGGGAAC CGTGGGCAGG CCAACTATGC CGCCAGCAAG
GCAGGGCTGA TTGGCCTGGC CCAGGCCTGG GCGCCGCGGC TCGCCGAGCG CGGTGGCAGC
ATCAACGCAG TGGCCCCCGG CTTTATCGAA ACCCATATGA CTGCAGCCAT GCCCATGGGC
CTGCGCGAGG CCGGGCGACG CTTGAGTTCA CTGGGCCAGG GCGGGCGCCC GCAAGATGTC
GCCGAAGCCA TTGCCTGGCT CAGCCAGCCG GGCTCAGGGG CTGTCAACGG CCAGGTGCTG
CGCGTTTGCG GCCAGGCATT GATGGGGGCT TGA
|
|---|
| Protein sequence | MSDRYLGFAN SNLGRRLVDA LGLPRPAPLE RWQAGRLRPV EGALVLGGGP LASQVEAIAP
CLTDEVYSFN ADNLQAEAWV AGLGPKIKAV VFDASHLSDS DALKQLREFF QPLLRSLAPC
AHVLVLGRAP EGLDNPLASV AQRALEGFSR SLAKELRNGA TAQLLYVAPD AENQLEGALR
FFLSPKSAFI SGQVLRMGAC ASQVEDWTRP LGGRRALITG AARGIGAAIA ETLARDGAEV
LLLDVPQASQ DLDALAARLG GKALPLDICA SDAAAQLLAA LPDGIDIVVH NAGITRDKTL
ANMTPEYWDA VLAVNLKAPQ LLTQALYDNG ALGENARITL LASVSGIAGN RGQANYAASK
AGLIGLAQAW APRLAERGGS INAVAPGFIE THMTAAMPMG LREAGRRLSS LGQGGRPQDV
AEAIAWLSQP GSGAVNGQVL RVCGQALMGA
|
|---|
| |