| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0620 |
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| Symbol | |
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| ID | 5868366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 707659 |
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| End bp | 708129 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545708 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001666867 |
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| Protein GI | 167031636 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0450509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA TTGTTCTCCT GCTGTGGCTT GCCTTGTGCT CCGAACAGGA TGTGCGTCAA
CGCCAGATCT CCAACCTGCT GACCCTGGGC GTGGCTACCT GCGCCCTAAT CTGGCTGTTC
GCCACCGGCC ACAGCTGGAT CGGCGCCGAC GCCAGCGATG CCGGCTGGGC GCTTGCCATC
GTCATGCTGC TGACCCTGCC AGGCTATATG CTCGGCCGCT TCGGCGCCGA CGACGTCAAG
CTGATGGGCG CCCTGGCCCT GGCCACCAGC CCGCAATATG TGCTCGGCAC CTTTATCGGC
GCCGGCGTCA GTGTGCTGGT ATGGCTGCTT ACCCGCCGGC GCCTGTGGAC CTTGCTCAAC
CCCAAGGTAA AGAAGCGTTT GCAGGCCCTG ACCGAGGAAA TGGGCGACAA ACAGGCGTTC
GTCCCCTATG TGCTGGCAGG GTTTCTTCTG ACGGCCGTAT GGATCCAATA A
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| Protein sequence | MQSIVLLLWL ALCSEQDVRQ RQISNLLTLG VATCALIWLF ATGHSWIGAD ASDAGWALAI
VMLLTLPGYM LGRFGADDVK LMGALALATS PQYVLGTFIG AGVSVLVWLL TRRRLWTLLN
PKVKKRLQAL TEEMGDKQAF VPYVLAGFLL TAVWIQ
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