Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0618 |
Symbol | |
ID | 5868364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 705059 |
End bp | 706723 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545706 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001666865 |
Protein GI | 167031634 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.475083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.135926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCTC TGGCCGTGCC CCTGCTGTTG CTGCCCTGGG CGCTTGCGGC CCAGGGCGAG CCGTTGCCGG GTTTTCTCGA CAGCCATGAA TACGAGCGGC GCTTGCCCAG CGCCAACCTG CCGATTGCGG CCTACCGCCT CGTCAGCCCC AACATACGGC TGGCCGAGGC GGCTATCCAC AAGCCTGACT GGGCTTCGGC CAATACCCCG CTGATACTGC AAAAAGTACG CTTCGAGGGC GGCACGGTGT TCCCCCTGAG CGACCTGCGT GAGCACTACC AAGCGCTGAT AGGGCGCCAG ACCACGTTGG GTGAATTGCA GCAATATACC GAGCGGCTGA CCCAGCGTTA TCGGCAGCAG GGCTACTTGT TGTCGTATGC CTATCTGCCA CCGCAGGATG TGGCAGAGGG TAGGGTCAGC GTGGTGCTGG TCGAAGGTTA CCTCCGTGAT TACCGCGTGG ACGGCGATAT CGGCCCGGCC AGCGAGTATT TGCAACAGTT GCTGGCGCGC CTTGAGGCTG AGCGGCCGCT GACGCGGGAA ACGCTGGAGC GTTTTCTGGG CCTGGCCGCG CGCATGCCTG GTGTGTCGGT AGAGGCTGAG CTGACAATGG CGCAGGCCGC TGATGGCGCC GCCCGGCTGA CCCTGCATGC GCGGCGCAAG CCATTCGGCG CCGCTGTGAC GGTGACCGAC TCCAGCCGCG ACACTGCACA GGCGTTGTTC ACGGCAACCA GCAATGCCCA GACCCGCCAT GGTGAACAAC TCACGGCCAG TTGGCTGCTG CCTCCAGGAG ACGACCAGGT CCATTACCAG CGTCTGGACT ACAGCCAGTA CCTGGACGCC GCCGGCAGTC AACTGCTGCT GTCGGCTTCG CGCTACCGCA GCGAGCCCGG CACGCGCATA CGCCTTGACC ATGGTCGCGA TATCACCCGC GAGCACGACA GCGAGCGCTG TGCGATAGGG CTTCGTCAGC CGGTGATCGT CAGGCCGGAT GAGTGGCTGG TGGTTCAGGG GCACTTGTAC GCAGTTCGTG AGCGCGATGA AGACCACACG GATGAGCAGC CATCGTCTCG GGACTACGAC ACCTACGTGC GTGCGCTGTC GTTCGAGGGC GATTGGCGCG AGATGGAGCA GAGGCGTATG CGTATCGTCA GTGCTGGAGT CTATCAGGGC CTGGATTACC TTGGGGCTCG AAGCGATGCC GACTACGACC TGGACTTTCT GCGGCTGCGG CTTTCCGGCT TGCAGAGCGA CGCACTGCTG GATAACTGGC AGGGCGTGGT GTCCGGGGCC TTGTACTGGA GTGATGACAA GTTGCCCGAC AGCGAGCGCG CGGGTTTTGG CGGGCAGAGT TTTGGCCGTG GATACCCGCG TGACCAGGCG GACGGGGACA AGGGCTGGGG TGTGGCTTAC GAGCTGAGCT ACAGCATGCA GGGGAGCGGG CTGGCGCTGG TTCGGCCATA TGCGGCAGTG GACACGGCGC AGGCCTGGCA TAACCGAGGG CCGGTGGAGG ATGCCCACCT GGCGTCGCTG GCGTTTGGTG TGCGGTTAGG AGATGGGCGC GTGTTCAATG TGGCGCTGGA AGTGGCCAAG CCGTTGGCGG ATGTGGCGCT CGATAGCCTG GACCGTGGGC CTCGGCTGAC CTTGAGCGTT GACGTTCAAC TGTAG
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Protein sequence | MRPLAVPLLL LPWALAAQGE PLPGFLDSHE YERRLPSANL PIAAYRLVSP NIRLAEAAIH KPDWASANTP LILQKVRFEG GTVFPLSDLR EHYQALIGRQ TTLGELQQYT ERLTQRYRQQ GYLLSYAYLP PQDVAEGRVS VVLVEGYLRD YRVDGDIGPA SEYLQQLLAR LEAERPLTRE TLERFLGLAA RMPGVSVEAE LTMAQAADGA ARLTLHARRK PFGAAVTVTD SSRDTAQALF TATSNAQTRH GEQLTASWLL PPGDDQVHYQ RLDYSQYLDA AGSQLLLSAS RYRSEPGTRI RLDHGRDITR EHDSERCAIG LRQPVIVRPD EWLVVQGHLY AVRERDEDHT DEQPSSRDYD TYVRALSFEG DWREMEQRRM RIVSAGVYQG LDYLGARSDA DYDLDFLRLR LSGLQSDALL DNWQGVVSGA LYWSDDKLPD SERAGFGGQS FGRGYPRDQA DGDKGWGVAY ELSYSMQGSG LALVRPYAAV DTAQAWHNRG PVEDAHLASL AFGVRLGDGR VFNVALEVAK PLADVALDSL DRGPRLTLSV DVQL
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