| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0602 |
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| Symbol | |
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| ID | 5868348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 680216 |
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| End bp | 682069 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545690 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001666849 |
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| Protein GI | 167031618 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0690484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCG CGAACTCCCG AGCCCACGTC GACTGCGTCA GCAGGGTGCT GAAGAATGCC
GATCGCCTGC CACAGGCGCC GGTTCCTGCG CTGATCCTCG ACTCATGGCG CCGCTCCATG
GAGCTGTACC GCCTCGACCC TGGGTCCCAG CAGGGGCCGC GTATCCTTTC CCAAAGCCTG
CTCAACGAAT GCCGCGAACG CGCCGAGCTG TTCCTGCGTA TCGCCAGCGA TGCCGTGGCA
CGCCTGCATG AGCGGGTGCG CGGCGCAGAC TACTGCGTGC TGCTGACCGA CGCCCAGGGG
CGCACCATCG ATTATCGGGT CGAGTCAGCC ATCCGCAACG ACTGCCGCAA AGCCGGGCTG
TACTTGGGTA CCTGCTGGTC AGAGGGCGAG GAGGGCACCT GTGGCGTGGC GGCGGTGCTG
ACCAGCAAGG CCCCGGTCAC GGTGCACAAG CGCGATCACT TTCGCGCCGC CTTCATCGGC
CTTACCTGCA CTGCCGCACC GGTATTCGAC CCGTTGGGCG AGCTTTTGGG TGTGGTGGAT
GTATCAGCCT TGCAGTCGCC AGACGATCGG CGCAGCCAGC ACCTGATCCG GCAACTGGTC
GAGCAGACGG CCCGCGAGAT CGAAAACGCC TTCTTCATGC ACAGTGCCCA GGGCCATTGG
GTGATGCGTG CCCATGGCAC GCCAGGTTAT GTGGAAAGCC AGCCCGATTA CCTGCTGGCC
TGGGATGCCG ATGGCCGCTT GCAGGCCATC AACAGCCTGG CGCGGCAACG CTTGGTGGAG
CGCTTGGGGC GTTTGCCCGA GCATATTGGC GAACTGTTCG ACCTAGACCA GTTGCGCCGG
GTGAGCGCGA CTTCGGCCCA GCGCCTGCCC GGCTTGGGTG GTTTGTATGG CCGGGTCAGC
GCGCCGCAAC GACGCGAGCG CGCGCAGCCG TTGCATCAGG CCCAGGACGC GCGGATCGAG
CAGCACCTGC GGTTGGCCAC GCGGGTCAAG GACTGCAACC TGGCGGTGCT GGTGCTAGGC
GAAACCGGTG CTGGCAAAGA GGTCTTTGCC CGCCAGTTGC ACCAGCAAAG CCTGCGCCGC
GACGGCCCGT TCGTCACACT GAACTGCGCG GCCATCCCGG AAAGCCTGAT CGAGAGCGAG
TTGTTCGGCT ATGTCGCAGG AGCCTTTACC GGGGCTTCCA GCAAAGGCAT GCAGGGGCTG
TTGCAGCAGG CCGATGGCGG TACGCTGTTC CTGGACGAAA TCGGCGATAT GCCGTTGCAC
CTGCAAACCC GCTTGTTGCG GGTGCTGGCC GAGGGCGAAG TGGCGCCGCT GGGTGCTGCA
CGGCGCGAGC GGGTGGACAT TCAGGTGATC TGTGCCACTC ACCGCGACCT GGCAACCATG
GTGGCGGACG GGCGTTTTCG TGAGGATCTG TATTTCCGCC TGGCCAATGC CCGGTTCGAG
CTGCCGCCGC TGCGTGAGCG CGAGGACCGC TTGGGGTTGA TTCACCAGTT GCTGGCCGAA
GAAGCCCAGG CCTGTGGAGT GGAGGTGGTA CTGGCCGATG CTGCGCTGCA GGCGTTGCTG
GTTTATCGCT GGCCGGGCAA TTTGCGCCAG CTGCGGCAGG TGTTGCGCTA TGCCTGTGCG
GTGAGCGAGG GCGGGCAGTT GCACTTGCAG GACCTGCCGC ATGAGGTTCG CGGTGACGCG
GTTGTTTCGG CTGAAAGCGG CGTATCGTGC CCGGCCCGGC AGTTGCTGCT GGATGCATTG
ATCCGTCATC GCTGGAAGCC AGCGGATGCG GCGCGGGCTT TGGGGATCTC GCGGGCGACC
CTGTATCGAC GGGTGCATGA GCATCGTATC GAGATGCCGC GGATGAAGGG GTAG
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| Protein sequence | MLAANSRAHV DCVSRVLKNA DRLPQAPVPA LILDSWRRSM ELYRLDPGSQ QGPRILSQSL
LNECRERAEL FLRIASDAVA RLHERVRGAD YCVLLTDAQG RTIDYRVESA IRNDCRKAGL
YLGTCWSEGE EGTCGVAAVL TSKAPVTVHK RDHFRAAFIG LTCTAAPVFD PLGELLGVVD
VSALQSPDDR RSQHLIRQLV EQTAREIENA FFMHSAQGHW VMRAHGTPGY VESQPDYLLA
WDADGRLQAI NSLARQRLVE RLGRLPEHIG ELFDLDQLRR VSATSAQRLP GLGGLYGRVS
APQRRERAQP LHQAQDARIE QHLRLATRVK DCNLAVLVLG ETGAGKEVFA RQLHQQSLRR
DGPFVTLNCA AIPESLIESE LFGYVAGAFT GASSKGMQGL LQQADGGTLF LDEIGDMPLH
LQTRLLRVLA EGEVAPLGAA RRERVDIQVI CATHRDLATM VADGRFREDL YFRLANARFE
LPPLREREDR LGLIHQLLAE EAQACGVEVV LADAALQALL VYRWPGNLRQ LRQVLRYACA
VSEGGQLHLQ DLPHEVRGDA VVSAESGVSC PARQLLLDAL IRHRWKPADA ARALGISRAT
LYRRVHEHRI EMPRMKG
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