| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0592 |
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| Symbol | |
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| ID | 5868338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 669661 |
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| End bp | 671010 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545680 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001666839 |
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| Protein GI | 167031608 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.91015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.137899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTC ACATTCTCGG TATTTGCGGC ACTTTCATGG GCTCGCTGGC GGTGCTGGCC
AAGGAACTTG GCCACCGCGT CACCGGCTCG GACGCCAACG TCTATCCCCC GATGAGCACC
CAGCTCGAGG CCCAGGGCAT CGAACTGACC CAAGGTTATG ACCCGGCTCA GCTGGACCCG
GCGCCAGACC TGGTGGTCAT CGGCAACGCC ATGTCGCGCG GCAACCCGGC GGTTGAATAC
GTGCTGAACA AGGGCCTGCC CTATGTCTCC GGCCCGCAGT GGCTGGCCGA CCACGTGCTG
CAAGGCCGTT GGGTGCTGGC CGTTGCCGGT ACCCACGGCA AGACCACCAC CAGCAGCATG
CTGGCCTGGG TGCTGGAGCA CGCCGGCATG AGCCCAGGCT TCCTGATTGG CGGTGTGCCG
CAGAACTTCT CGGTGTCGGC GCGTTTGGGC GACACGCCGT TCTTCGTGGT CGAAGCCGAC
GAATACGACA GCGCGTTCTT CGACAAGCGC TCGAAGTTCG TTCACTACCA CCCACGTACT
GCGATCCTCA ACAACCTTGA GTTCGATCAC GCGGACATCT TCCCGGACCT GGCCTCGATC
GAGCGACAGT TCCATCACTT GGTGCGTACC ATCCCCAGCG AGGGCCTGGT CATCCATCCG
ACCACCGAGC AAGCGCTGGA GCGAGTGATC GGCATGGGCT GCTGGACCCC GGTGCAAACC
ACCGGTGAAG GAGGCCAGTG GCAAGCTCGC CTGCTCAGCC CTGATGGCTC GCGCTTCGAA
GTGTTGTTCG AAGGCGAGGC GCAGGGCGTG GTGGACTGGG CACTGACCGG CCAGCACAAC
GTCGCCAACG CCTTGGCCAC CCTGGCTGCG GCCCGCCATG TTGGCGTGGT GCCGGCCATG
GGGATCGCTG GCCTGAGTGC CTTCAAGAGC GTCAAGCGGC GCATGGAGAA GGTGGCCGAA
GTGCAGGGCG TGACCATCTA CGATGACTTC GCCCACCACC CGACCGCCAT TGCCACCACC
CTCGACGGCC TGCGCAAGCG TGTTGGCGAG GCACCGGTGA TCGCGGTGAT CGAGCCACGC
TCCAACTCAA TGAAGCTTGG TGCTCACCGT GACGGCCTGC CAGAAAGCGT CAACGATGCG
GACCAGGTGA TCTGGTATGC ACCGGCCAAC CTCGGCTGGG ACCTGGCCGC CACCGCCGCC
CAATGCAAGG TGCCGAGCGT GGTGGCCGAC AGCCTCGAAG CGATCATCGA ACGGGTCAAA
GGCCAGGCTC GCCCAGGCAC CCATGTGGTG ATCATGAGCA ACGGCGGTTT CGGTGGCCTG
CACGGCAAGT TGGCCGAGGC GCTGAAGTGA
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| Protein sequence | MHIHILGICG TFMGSLAVLA KELGHRVTGS DANVYPPMST QLEAQGIELT QGYDPAQLDP
APDLVVIGNA MSRGNPAVEY VLNKGLPYVS GPQWLADHVL QGRWVLAVAG THGKTTTSSM
LAWVLEHAGM SPGFLIGGVP QNFSVSARLG DTPFFVVEAD EYDSAFFDKR SKFVHYHPRT
AILNNLEFDH ADIFPDLASI ERQFHHLVRT IPSEGLVIHP TTEQALERVI GMGCWTPVQT
TGEGGQWQAR LLSPDGSRFE VLFEGEAQGV VDWALTGQHN VANALATLAA ARHVGVVPAM
GIAGLSAFKS VKRRMEKVAE VQGVTIYDDF AHHPTAIATT LDGLRKRVGE APVIAVIEPR
SNSMKLGAHR DGLPESVNDA DQVIWYAPAN LGWDLAATAA QCKVPSVVAD SLEAIIERVK
GQARPGTHVV IMSNGGFGGL HGKLAEALK
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