Gene PputGB1_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0574 
Symbol 
ID5868320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp648320 
End bp648562 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content63% 
IMG OID641545662 
Productexodeoxyribonuclease VII small subunit 
Protein accessionYP_001666821 
Protein GI167031590 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA AAAAAGCCTC CCTCGATTTT GAGCAATCCC TCGCAGACCT GCAAGCACTG 
GTCGAGCGCC TGGAGAACGG CGAGTTGTCG CTGGAAGAGT CGCTGGCCGC CTTCGAACAA
GGCATCGCCC TGACCCGTGA TTGCCAGGGC GCCCTGGCCC AGGCCGAACA GAAGGTGCAA
ATTCTGCTGG AGCGCGACGG CGAGCTGGCT GCCCAGCCCT TCGACGCGGA GCCAGACGTA
TGA
 
Protein sequence
MARKKASLDF EQSLADLQAL VERLENGELS LEESLAAFEQ GIALTRDCQG ALAQAEQKVQ 
ILLERDGELA AQPFDAEPDV