Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0570 |
Symbol | |
ID | 5868316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 642647 |
End bp | 643459 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641545658 |
Product | periplasmic binding protein |
Protein accession | YP_001666817 |
Protein GI | 167031586 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGC TGCCTGGCCT GCTGGCGCTG TTAGCCTGCA CCGCGCTGGC CGCCGACCCC TTGCGGGTGG TCAGCCTGGC CCCCTCGATG ACTGAAATCA TGCTTGAGCT GCAGGCCGAC GACTTGTTGG TGGGCGTGCT CGACGGTGGC GAACGGCCGG CTGCCCTGGG CGACTTGCCC TCGGTCGGGC GCCAAGGGCA GCTGGACATG GAGCGTTTGC TCAGCCTGCG CCCCGACTTG TTGTTGCTGT GGCCTGGCAG CGTATCGCCC GCCCAGCGCG ACCAGCTCAA GCGCCTGGGC ATTGCCACCT TCAGTGCCGA ACCCCATGAC ATCGACCAAC TGATCGAGCA GATCGAGGCC ATTGCCGGGC GCATTGGGCG TGCCGAGCAA GGCCACGCGT ACGCTCAAGC CCTGCGCAAG CGGCTGCAGC AGCTGCGCCA GCAGTATGGG CGAGACGAAC CCTTGCAGGT GTTCTATCAA GTGTGGGATA GGCCGTTGTA CACGCTCGGT GGCCGCCAGG TGGTGAGCGA CGCCCTGGCC GTGTGCGGGG CGCGCAACGT ATTTGCCGAC CTCAGCCAGC CGGCACCGCA GGTGAGTGTG GAGTCTGTAC TGCTGCGTGA TCCGCAGGTC ATCCTGGCCG GCGATCAGGC ACAGTTGGCC AGCTGGAAGG CCTGGCCGCA GCTTCGAGCC GTGGCTGATG GGCGCCTGCT GGTGGTGCCT GACAAAGGCC TGGAGCGCCC CAGCGGGCAG ATGATCGAGG CCACCGCCCG CCTGTGCGCG TTGCTCGCGG CTAAAGCACC GGTGTCCAGG TAA
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Protein sequence | MRLLPGLLAL LACTALAADP LRVVSLAPSM TEIMLELQAD DLLVGVLDGG ERPAALGDLP SVGRQGQLDM ERLLSLRPDL LLLWPGSVSP AQRDQLKRLG IATFSAEPHD IDQLIEQIEA IAGRIGRAEQ GHAYAQALRK RLQQLRQQYG RDEPLQVFYQ VWDRPLYTLG GRQVVSDALA VCGARNVFAD LSQPAPQVSV ESVLLRDPQV ILAGDQAQLA SWKAWPQLRA VADGRLLVVP DKGLERPSGQ MIEATARLCA LLAAKAPVSR
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