Gene PputGB1_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0570 
Symbol 
ID5868316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp642647 
End bp643459 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID641545658 
Productperiplasmic binding protein 
Protein accessionYP_001666817 
Protein GI167031586 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC TGCCTGGCCT GCTGGCGCTG TTAGCCTGCA CCGCGCTGGC CGCCGACCCC 
TTGCGGGTGG TCAGCCTGGC CCCCTCGATG ACTGAAATCA TGCTTGAGCT GCAGGCCGAC
GACTTGTTGG TGGGCGTGCT CGACGGTGGC GAACGGCCGG CTGCCCTGGG CGACTTGCCC
TCGGTCGGGC GCCAAGGGCA GCTGGACATG GAGCGTTTGC TCAGCCTGCG CCCCGACTTG
TTGTTGCTGT GGCCTGGCAG CGTATCGCCC GCCCAGCGCG ACCAGCTCAA GCGCCTGGGC
ATTGCCACCT TCAGTGCCGA ACCCCATGAC ATCGACCAAC TGATCGAGCA GATCGAGGCC
ATTGCCGGGC GCATTGGGCG TGCCGAGCAA GGCCACGCGT ACGCTCAAGC CCTGCGCAAG
CGGCTGCAGC AGCTGCGCCA GCAGTATGGG CGAGACGAAC CCTTGCAGGT GTTCTATCAA
GTGTGGGATA GGCCGTTGTA CACGCTCGGT GGCCGCCAGG TGGTGAGCGA CGCCCTGGCC
GTGTGCGGGG CGCGCAACGT ATTTGCCGAC CTCAGCCAGC CGGCACCGCA GGTGAGTGTG
GAGTCTGTAC TGCTGCGTGA TCCGCAGGTC ATCCTGGCCG GCGATCAGGC ACAGTTGGCC
AGCTGGAAGG CCTGGCCGCA GCTTCGAGCC GTGGCTGATG GGCGCCTGCT GGTGGTGCCT
GACAAAGGCC TGGAGCGCCC CAGCGGGCAG ATGATCGAGG CCACCGCCCG CCTGTGCGCG
TTGCTCGCGG CTAAAGCACC GGTGTCCAGG TAA
 
Protein sequence
MRLLPGLLAL LACTALAADP LRVVSLAPSM TEIMLELQAD DLLVGVLDGG ERPAALGDLP 
SVGRQGQLDM ERLLSLRPDL LLLWPGSVSP AQRDQLKRLG IATFSAEPHD IDQLIEQIEA
IAGRIGRAEQ GHAYAQALRK RLQQLRQQYG RDEPLQVFYQ VWDRPLYTLG GRQVVSDALA
VCGARNVFAD LSQPAPQVSV ESVLLRDPQV ILAGDQAQLA SWKAWPQLRA VADGRLLVVP
DKGLERPSGQ MIEATARLCA LLAAKAPVSR