Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0567 |
Symbol | |
ID | 5868313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 640741 |
End bp | 641484 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545655 |
Product | hypothetical protein |
Protein accession | YP_001666814 |
Protein GI | 167031583 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.230648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATAA GGACTGTGCT GCTGGCAATG CTGCTGAGTG TCGCCCCGTG GGTGAGCGCT GCCGAAGGCG TACCCAAGCA GATCCATCTG GTCAGCGAGG AGTGGCTCGA CTACACCAAC GCCGACGGTA CCGGGGTGGC CTGGGACGTG TTGCGCAAGG TGTTCGAGCC GGCCGGAGTC AAGGTGGTTA CCCAGAGCGC GCCCTACAGC CGTGCGGTCG GCTTGGTGAA GCGCGGCGAG GCTGATGCCT GGGTTGGCTC GTACAAGGAA GAAAACGACG ACAATCTGTA CCCGCGCTGG CACTTCGACA TGGACCATAT CTACGCCCTG GGGCTGGCCA GCAAGCCAGT GCCTACACCG CAGAACGTGG GCAAATATCG CTTGGCCTGG GTGCGTGGCT ACGACTACGG CAGCTACTTG CCTGATGTGC ACGAATTTCG CGAGATTCAG CGCCGTGAAG GCATCTTGCC GATGCTTGAG CATGATCGCG TGGACTTCTA CATCGATGCG CAGACCGAAG TCGATTATGT CCTGAGCCAG TCTTCGCAGC CCGAGCGCTT CCGTCGTACC CATGTGGCCG AACTGCCGCT GTACCTGGCT TTCGCCCGCA ACGACCAGGC CAAGGCTCTG TGCGACCTGT TCGACAAGCG CATGGCCGAG CTGGTACGCA GCGGCGAGCT GAAGCCGATC TTCGAACGCT GGAAGCAGCC GTATCCGTTC AGTGCCGATA GCAAACCCCA TTGA
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Protein sequence | MAIRTVLLAM LLSVAPWVSA AEGVPKQIHL VSEEWLDYTN ADGTGVAWDV LRKVFEPAGV KVVTQSAPYS RAVGLVKRGE ADAWVGSYKE ENDDNLYPRW HFDMDHIYAL GLASKPVPTP QNVGKYRLAW VRGYDYGSYL PDVHEFREIQ RREGILPMLE HDRVDFYIDA QTEVDYVLSQ SSQPERFRRT HVAELPLYLA FARNDQAKAL CDLFDKRMAE LVRSGELKPI FERWKQPYPF SADSKPH
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