Gene PputGB1_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0562 
Symbol 
ID5868308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand+ 
Start bp637081 
End bp638172 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID641545650 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_001666809 
Protein GI167031578 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCA ACAGCATCGA AGAACTGGTC GAAGACATCC GCCAGGGCAA AATGGTCATC 
CTCATGGATG ACGAAGACCG CGAGAACGAA GGCGACATCA TCATGGCAGC CGAATGCTGC 
CTGCCCGAGC ACATCAACTT CATGGCCAAG CACGCCCGTG GTCTGATCTG CATGCCGATG 
ACCCGCGAGC GTTGCGAAAC GCTGAAGCTG CCACTGATGG CACCGCGCAA CGGCTCGGGC 
TTCGGCACCA AGTTCACCGT ATCGATCGAA GCCGCCGAAG GCGTCACCAC CGGTATTTCC 
GCCGCTGACC GCGCACGCAC CGTGCAGGCT GCCGCAGCCA AGGATGCCAA GGCCGAAGAC 
ATCGTCAGCC CTGGCCACAT CTTCCCGTTG ATGGCCCAGC CAGGTGGCAC CCTGGCTCGC 
GCTGGCCACA CCGAAGCCGC CTGCGACCTT GCGCGCATGG CTGGTTTCGA GCCAAGCGGC 
GTGATCTGCG AAGTGATGAA CGACGATGGC ACCATGTCGC GTCGCGCCGA GCTGGAGGTG 
TTTGCCGCCG AGCACGGTCT GAAGATCGGC ACCATCGCCG ACCTGATCCA CTACCGCATG 
ATCCACGAGC GCACCGTGCA GCGTGTTTCC GAGCAGCCGG TGGAGAGCGA GCTGGGTGAA 
TTCAACCTGG TCACCTACCG TGATGCGGTG GAAGGCGACG TGCACATGGC CCTGACCCTG 
GGCAAGATCT GCGCCGAAGA GCCGACCTTG GTGCGTGTGC ACAACATGGA CCCGCTGCGC 
GACCTGCTGC TGGTCAAGCA GCCGGGCCGC TGGAGCCTGC GCGCAGCCAT GGCTGCCGTG 
GCCGAGGCTG GCAGTGGCGT GGTCTTGCTG CTGGGCCACC CGCTGGATGG CGACGTGCTG 
CTGGCGCACA TTCGTGAAAG CGCGGGTGAT GCACCGACCA AGGCACCGAC CACCTACAGC 
ACCGTGGGTG CCGGTTCGCA GATCCTGCGC GACCTTGGTG TGCGCAAGAT GCGCCTGATG 
AGTTCGCCGA TGAAGTTCAA CGCGATATCC GGATTCGATC TGGAAGTTGT AGAATACGTG 
CCCTCCGAGT GA
 
Protein sequence
MALNSIEELV EDIRQGKMVI LMDDEDRENE GDIIMAAECC LPEHINFMAK HARGLICMPM 
TRERCETLKL PLMAPRNGSG FGTKFTVSIE AAEGVTTGIS AADRARTVQA AAAKDAKAED 
IVSPGHIFPL MAQPGGTLAR AGHTEAACDL ARMAGFEPSG VICEVMNDDG TMSRRAELEV 
FAAEHGLKIG TIADLIHYRM IHERTVQRVS EQPVESELGE FNLVTYRDAV EGDVHMALTL 
GKICAEEPTL VRVHNMDPLR DLLLVKQPGR WSLRAAMAAV AEAGSGVVLL LGHPLDGDVL 
LAHIRESAGD APTKAPTTYS TVGAGSQILR DLGVRKMRLM SSPMKFNAIS GFDLEVVEYV 
PSE