| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0551 |
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| Symbol | |
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| ID | 5868297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 627968 |
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| End bp | 629233 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545639 |
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| Product | hypothetical protein |
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| Protein accession | YP_001666798 |
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| Protein GI | 167031567 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.706049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGC TCCGCCTTGC CCTGGCCAGC CTGGCCAACC GCCGTTTCAC TGCGTTTCTG
ACCGCTTTTG CCATTGCCTT GTCGGTGTGC CTGCTGCTGG CCGTGGAGCG GGTCCGTACC
GAGGCTCGCG CCAGCTTCGC CAGCACCATC AGCGGAACCG ACCTGATCGT CGGCGCCCGC
TCTGGCTCGG TGAACCTGCT GCTGTATTCG GTGTTCCGCA TTGGTAACGC CACCAACAAC
ATCCGTTGGG ACAGCTTCCA GCATTATGCC CAGGACCCAC GGGTGAAGTG GGCAATCCCG
ATCTCGCTGG GCGACTCCCA CCGTGGCTAC AGGGTGATGG GTACCACGGC GGATTACTTC
AGCCATTACC AGTACGGTCG CCGCCAGCAC CTGGAACTGA GCCAGGGACG TGAGTTCGCC
AGCGACCCCT TCGAAGTGGT GCTCGGCGCC GAAGTGGCCG AGGCGCTGCA TTACAAGCTG
GGTGACAAGC TGGTACTGGC CCACGGCGTG GCCGCCATCA GCCTGGTCAA GCACGACGAC
AAACCATTCA CCGTGGTCGG TGTGCTCAAA CGCACCGGCA CACCGGTCGA TCGCACCCTG
CATATCAGCC TGGGGGGTAT GGAAGCGATC CATATCGACT GGCACAACGG CGTACCCGCC
CGTGGCGCCG GGCGCATCAG CGCCGAGCAA GCACGCGCGA TGGACCTGCA ACCTGCCGCC
ATCACTGCAT TCATGCTGGG GCTGAACAGC AAGATCGCGA CCTTCAGCCT GCAGCGGGAG
ATCAATGAGT ACCGCAGCGA GCCGCTGCTG GCGATCCTAC CTGGGGTGGC CCTGCAGGAG
CTCTGGAGCC TGATGGGCAC TGCCGAACAA GCACTGTTCG TGGTGTCGCT GTTCGTGGTG
CTGACCGGCC TGATTGGCAT GCTCACGGCG ATTCTTACCA GCCTCAACGA GCGCCGCCGG
GAGATGGCGA TCTTACGCTC GGTCGGTGCC AGGCCTTGGC ATATCGCGGG GCTGCTGGTA
CTGGAGGCAC TGTCACTGGC GGCGGTCGGG ATCGTGGCCG GGCTTGGCTT GCTGTACGCG
GGGATTGCCC TTGCGCAGGG GTATGTACAG GCGAACTATG GCTTGTATCT GCCACTGGCC
CTACCTAGCG CTCATGAATG GACCTTGCTG GCTATCATCC TGGGGGCTGC GTTGCTGATG
GGTAGCGTGC CTGCGTGGCG GGCGTATCGG CAGTCGCTGG CCGATGGTTT GTCCATACAC
CTCTGA
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| Protein sequence | MYLLRLALAS LANRRFTAFL TAFAIALSVC LLLAVERVRT EARASFASTI SGTDLIVGAR
SGSVNLLLYS VFRIGNATNN IRWDSFQHYA QDPRVKWAIP ISLGDSHRGY RVMGTTADYF
SHYQYGRRQH LELSQGREFA SDPFEVVLGA EVAEALHYKL GDKLVLAHGV AAISLVKHDD
KPFTVVGVLK RTGTPVDRTL HISLGGMEAI HIDWHNGVPA RGAGRISAEQ ARAMDLQPAA
ITAFMLGLNS KIATFSLQRE INEYRSEPLL AILPGVALQE LWSLMGTAEQ ALFVVSLFVV
LTGLIGMLTA ILTSLNERRR EMAILRSVGA RPWHIAGLLV LEALSLAAVG IVAGLGLLYA
GIALAQGYVQ ANYGLYLPLA LPSAHEWTLL AIILGAALLM GSVPAWRAYR QSLADGLSIH
L
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