| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0549 |
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| Symbol | |
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| ID | 5868295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 626593 |
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| End bp | 627276 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545637 |
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| Product | OmpW family protein |
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| Protein accession | YP_001666796 |
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| Protein GI | 167031565 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.742148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGT CCTTGCTCGG CGCCTCGCTT GTGGCCCTTG CGCTCGCCGC CCCTGTTGCC
CACGCTCACC AGGCAGGCGA TGTCATCGTC CGCGCAGGCG CCATCACCAC CGCCCCTAAC
GAAAGCAGCG GCGACCTGAA ATTCGATGGC AACAAGGTTT CGGGCACCAA GGCAACCCTG
GACAGCGACA CCCAGCTGGG CTTGACCTTT GCCTATATGC TCACCGACCA CATCGGCCTG
GAGCTGCTGG CAGCCACCCC GTTCAAGCAC ACCGTAGGCG TAAAAGGCCT GGGCGGCGGC
CTGGACGGCA AGCTGGCCGA CATCAAGCAA CTGCCACCGA CCCTGTCGCT GCAGTACTAC
CCGATGGAAC CGAACTCCAA GTTCCAGCCC TATGCCGGCG TGGGCATCAA CTACACCCTG
TTCTTCGATG AAGACCTCAG CAGTGCCCGC AAGCAGCAAG GCTTCAGCAA CCTGAAACTG
CAGGACTCGA TCGGGATCGC CGGCCAGCTG GGCATGGACT ACATGATCAC CGACAACCTG
CTGGTCAACG CCTCGGTCTG GTACGTCGAC ATCGACACCA AGGCCAGCGT CAACGGCCCG
ACCGCTTTGG GCTACAGCAA GACCAAGGTC GACGTCGATG TCGACCCGTG GGTGTACATG
GTCGGCCTTG GCTACAAGTT CTGA
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| Protein sequence | MNKSLLGASL VALALAAPVA HAHQAGDVIV RAGAITTAPN ESSGDLKFDG NKVSGTKATL
DSDTQLGLTF AYMLTDHIGL ELLAATPFKH TVGVKGLGGG LDGKLADIKQ LPPTLSLQYY
PMEPNSKFQP YAGVGINYTL FFDEDLSSAR KQQGFSNLKL QDSIGIAGQL GMDYMITDNL
LVNASVWYVD IDTKASVNGP TALGYSKTKV DVDVDPWVYM VGLGYKF
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