| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0539 |
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| Symbol | |
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| ID | 5868285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 617617 |
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| End bp | 619059 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545627 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001666786 |
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| Protein GI | 167031555 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.719385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAG TAATCAACGA TTTCCTTTCG GGGAAACTCC TCATCGTGCT GATCGTAGGG
CTGGGTAGCT ACTTCACCCT CCGCTCCCGG TTCGTCCAGT TCCGCCATTT CGCCCATATG
TTCAGCGTGT TCAAGGAATC GCTGCGTGGC CAGGCAGGCC AGCTGAGCTC CTTCCAGGCA
CTGATGCTGA GCCTGGCCGG CCGCGTAGGC GCCGGTAACA TCGCTGGTGT CGGTATCGCT
GTGACCCTGG GTGGCCCAGG TGCCGTGTTC TGGATGTGGG TCACCGCACT GGTGGGTATG
TCCAGCAGCT TCTTCGAATG TACCCTGGCC CAAGTGTACA AGCGCGCGGA TGGCGATGGC
CTGTACCGCG GTGGCCCGGC CTACTACATC CAGCACGGGC TGAAGCTGAA AAGCATGGCC
ATCGTGTTCT CGATCCTGCT GCTGGTCACC TACGGCTTCG CCTTCATCGG CCTGCAGTCT
TACACCGTGA CTCACTCGCT GCAGAACGCC TTCGCCTTCG ACCCGAAACA CACCGGTATC
GTCCTGGCCG TGCTGCTGGC CGTCACCTTC ATCGGCGGCA TCAAGCGTAT CGCTGCGGTG
TCGGACTTGC TGGTGCCGGT CAAGACCCTG GCCTACATCG GTGTGACCCT GTACGTGATC
GGCACCCAGA TCGAACATGT GCCGGCCATG CTGGAAACCA TCTTCAAAAG CGCCTTCGGC
CTTGACCCGG CCTTCGGTGG CCTGCTCGGC AGCGCCATCG TCATGGGCGT CAAACGTGGC
GTATTCGCCA ACGAAGCGGG CCTGGGCAGT GCGCCGAACG TGGCGGCCGT GGCGGCCGTG
AAACACCCGG GTGCGCAGGG CGTGGTGCAG GCTTTCAGCG TGTTCCTCGA CACCTTCGTG
ATCTGCACCT GCACCGCACT GCTGATTCTG CTGTCGGGCT TCTACACCCC TGGTTTCGAG
GGCGACGGCA TTGTCCTGAC CCAGAACTCG CTGGCCGCCG TGGTGGGTGA CTGGGGCCGC
GTGTTCGTCA GCGTGGCGCT GTCGCTGTTC GTGTTCACCT GCATCCTCTA CAACTACTAC
CTGGGCGAGA ACAGCCTGCA GTTCCTGAGC CGCAACCGTG TGGTGCTGAT GGTGTTCCGT
GGCCTGGTGC TGGCGTTGGT GGTTTGGGGG TCGATGCAAG ACCTGTCGAC TGTGTTCGCC
TTCGCCGACA TCACCATGAC TTGCCTGGCC TTCGTCAACC TGGTCGCCCT GGCCCTGCTG
TTCAAGGTCG GCCTGCGCGT CATGCGCGAC TACGACGACC AGCGCAAGGC CGGTGTGCAG
CAGCCAGTGT TCGACTCATC CAAGTTCGCC GACCTGGACC TGGACCGTAA TGCCTGGCCT
GCCAATCCGC AGGTGGAAAC AGCCGCTGAC AAAGCAGCCG GCCAAGCTCA GCCGCAGCGC
TGA
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| Protein sequence | MLEVINDFLS GKLLIVLIVG LGSYFTLRSR FVQFRHFAHM FSVFKESLRG QAGQLSSFQA
LMLSLAGRVG AGNIAGVGIA VTLGGPGAVF WMWVTALVGM SSSFFECTLA QVYKRADGDG
LYRGGPAYYI QHGLKLKSMA IVFSILLLVT YGFAFIGLQS YTVTHSLQNA FAFDPKHTGI
VLAVLLAVTF IGGIKRIAAV SDLLVPVKTL AYIGVTLYVI GTQIEHVPAM LETIFKSAFG
LDPAFGGLLG SAIVMGVKRG VFANEAGLGS APNVAAVAAV KHPGAQGVVQ AFSVFLDTFV
ICTCTALLIL LSGFYTPGFE GDGIVLTQNS LAAVVGDWGR VFVSVALSLF VFTCILYNYY
LGENSLQFLS RNRVVLMVFR GLVLALVVWG SMQDLSTVFA FADITMTCLA FVNLVALALL
FKVGLRVMRD YDDQRKAGVQ QPVFDSSKFA DLDLDRNAWP ANPQVETAAD KAAGQAQPQR
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