Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0538 |
Symbol | |
ID | 5868284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 616556 |
End bp | 617554 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545626 |
Product | asparaginase |
Protein accession | YP_001666785 |
Protein GI | 167031554 |
COG category | [E] Amino acid transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.354771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCCA TGCGTGCAGT AAAGAATCTT CTCGTTCTCT ATACCGGTGG CACCATCGGC ATGCTCGAAA CCCCGGAAGG CCTGGCGCCG GCCGGTGGCT TCGAAGCGCG GATGCGTGAA CACTTTGCCC AGATGGCCGA TGCACCCAAG CTGCAATGGG CGCTGCAAGA GCTGAACCCG CTGCTGGACA GCGCCAACAT GCAACAGCAC AACTGGTTGG CGATGCGCGA TGCCATCGTC GAAGCCGTGG ATGTTGCAGG CCATGATGGC GTGTTGGTGT TGCATGGCAC CGACAGCATG GCTTACAGCG CTGCAGCGTT GTCGTTCCTG TTGCTGGGCC TGCCCGTACC GGTGCTGTTG ACCGGCTCGA TGCTGCCTGC TGGTGCACCG GGTAGCGATG CCTGGGCCAA CCTGTGCGGC GCATTGCGCC AGTTCGAACA AGGCCTGGAA GGTGGAGTGC ATCTGTACTT CCACGGCCAA CTGCTGCATG GCTGCCGGGC GTCCAAGCTG CGCAGCGAAG CGTTCGATGC CTTTGCCGCT CTACCGCGCC ATCGGGGTGG TGAGCGGGCC TCGGCGATTC CCGCCGAACT TGGCTACATG CATCCACGCC AGCCGGTCAA CCTGGCCGTA GTGCCGGTGT TCCCAGGGCT GCAGGCCGAG CACTTGCAGG GGCTGATCGA CAGCGGTGTA CAAGGGGTTC TGCTGGAGTG CTATGGCAGC GGTACGGGTC CATCGGATGA CCAAGCGCTG CTTGCTGTGC TGAGCGCGGC ACGCCAGCGC GGCGTGATGC TGGCGGCTAT CAGCCAGTGC CCAGAAGGCT CCGTGGTGTT CGATACCTAT GCGGCAGGTA ACCGCTTGCG CGGGGCCGGC CTGATCAGTG GTGGCGGCAT GACCCGTGAG GCAGCGCTGG GCAAGATGGT TGCGCTGCTG GGGGCTGGGT TGGATGTCGA AGCCGCCGAG CAGTGGTTTG CGCTGGACCT GTGTGGGGAA CGGGCGTAG
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Protein sequence | MLAMRAVKNL LVLYTGGTIG MLETPEGLAP AGGFEARMRE HFAQMADAPK LQWALQELNP LLDSANMQQH NWLAMRDAIV EAVDVAGHDG VLVLHGTDSM AYSAAALSFL LLGLPVPVLL TGSMLPAGAP GSDAWANLCG ALRQFEQGLE GGVHLYFHGQ LLHGCRASKL RSEAFDAFAA LPRHRGGERA SAIPAELGYM HPRQPVNLAV VPVFPGLQAE HLQGLIDSGV QGVLLECYGS GTGPSDDQAL LAVLSAARQR GVMLAAISQC PEGSVVFDTY AAGNRLRGAG LISGGGMTRE AALGKMVALL GAGLDVEAAE QWFALDLCGE RA
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