| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0536 |
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| Symbol | |
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| ID | 5868282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 613083 |
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| End bp | 614510 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641545624 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001666783 |
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| Protein GI | 167031552 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCA GCCTCGCCAG CGACACCCCA CGCCTGCCTT CAATCGATAC CCTCCTGCGC
CACCAGGCCT GCCTTCCGCT GATCGATCGC CACGGTCGCG AAGGCGTCCT GGCCACCCTG
CGGCAATTGC TCGACGACCT GCGCAACCTT GTCCGCAACG GTGAGCTCAC CCCCGCCGAA
CTGGCCCCCG AAATCCTTCT GGGCCGCACG GGCGAACGCC TGGCCGCTCA GCAACGCAGC
CAGGTCCGCC GCGTGTTCAA CCTCACCGGT ACTGTGCTGC ACACCAACCT CGGTCGCGCC
CTGTTGCCTG AAGCGGCCAT CGAGGCCATG CAGACTGCCG CCCGCTATCC ACTCAACCTG
GAATTTGACC TGGCTACCGG TAAGCGCGGC GACCGTGACG ATTTGATCGA GGGTTTGATC
CGTGAGTTGA CCGGCGCCGA GGCCGTCACC GTGGTCAACA ACAATGCCGC CGCCGTGCTA
CTGGCGCTCA ACAGCCTGGG CGCGCGCAAG GAGGGCATCA TCTCTCGTGG CGAGCTGATC
GAGATCGGCG GCGCCTTCCG CATCCCCGAC ATCATGGCCC GTGCCGGCGT GAAGCTGCAC
GAGATCGGCA CTACCAACCG CACCCACGCC CGCGACTACG AGGCCGCCAT CGGCCCACGT
ACCGGCTTGC TGATGCGCGT GCATTGCAGC AACTACAGCA TCCAGGGCTT CACCACCCAG
GTGCCCACGG CCGAGCTGGC GAGCATCGCC CACCAACGTG ACCTACCGCT GCTTGAAGAC
TTGGGCAGCG GCAGCCTGCT CGACCTTACC CGCTGGGGCC TGCCCGCCGA GCCGACCGTA
CGCCAGGCCT TGGCCGACGG CGCCGATATC GTCACCTTCA GTGGCGACAA ACTGTTGGGC
GGGCCGCAAG CCGGGATCAT TGTCGGCCGC AAGGACTTGA TCGCCAGGAT CAAGAAAAAC
CCGCTCAAGC GTGCGCTGCG CGTCGACAAG ATCACCCTCG CCGCACTCGA AGCGGTCCTA
GCGCTGTACC GCAACCCTGA CCGCTTGGCC GAGCGCCTGC CCACCCTGCG TCTGCTGACC
CGTAGCCAGG CCGAGATCCA AGCCCAAGCC GAGCGTCTGG CGCCTGAAGT CAAGGCGCAC
CTCGGCGAGC AATGGGCCGT CAGCGTAGCG CCTGCTTTGG GCATGATCGG CAGTGGCAGC
CAGCCGGTGG CGCGCTTGCC CAGCGCTGCA CTGTGTCTGC GCCCGCAGGT GTCGAAGAAG
TTGCGCGGGC GCAGCCTGCA CGTGCTGGAG CGAGCCCTGC GCGACCTCCC GGTGCCGGTG
CTGGGCCGCC TCGACGACGA TGCCCTCTGG CTGGACCTGC GCCAACTGGA TGACGAAGCC
CAGTGGCTCG CTCAATTGCC AGCCCTGCAG TTGGGGCCGG TGCAGTGA
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| Protein sequence | MSSSLASDTP RLPSIDTLLR HQACLPLIDR HGREGVLATL RQLLDDLRNL VRNGELTPAE
LAPEILLGRT GERLAAQQRS QVRRVFNLTG TVLHTNLGRA LLPEAAIEAM QTAARYPLNL
EFDLATGKRG DRDDLIEGLI RELTGAEAVT VVNNNAAAVL LALNSLGARK EGIISRGELI
EIGGAFRIPD IMARAGVKLH EIGTTNRTHA RDYEAAIGPR TGLLMRVHCS NYSIQGFTTQ
VPTAELASIA HQRDLPLLED LGSGSLLDLT RWGLPAEPTV RQALADGADI VTFSGDKLLG
GPQAGIIVGR KDLIARIKKN PLKRALRVDK ITLAALEAVL ALYRNPDRLA ERLPTLRLLT
RSQAEIQAQA ERLAPEVKAH LGEQWAVSVA PALGMIGSGS QPVARLPSAA LCLRPQVSKK
LRGRSLHVLE RALRDLPVPV LGRLDDDALW LDLRQLDDEA QWLAQLPALQ LGPVQ
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