| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0532 |
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| Symbol | |
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| ID | 5868278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 608029 |
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| End bp | 610458 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545620 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001666779 |
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| Protein GI | 167031548 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.170319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.968416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC ACTGGTCCGA TATCGCCAAC GCGAATCTGG TCCTGGTGAT GGGTGGCAAC
GCAGCAGAAG CGCATCCGTG CGGCTTCAAG TGGGTGACCG AGGCCAAGGC GCACAACAAG
GCGCGGCTGA TCGTGGTCGA CCCGCGGTTT ACCCGTACCG CTTCGGTCGC GGACTACTAC
GCGCCAATTC GCACCGGTAC CGACATCGCC TTCATGGGCG GGCTGATCAA CTACCTGCTG
AGCACCGACA AGATCCAGCA CGAGTACGTG CGCAACTACA CCGACGTGTC GTTCATCGTC
AAAGAGAACT ATGGCTTCGA GGATGGGCTG TTCAGCGGCT ACGACGAAGC CAAGCGTGTG
TACGCCGACA AGTCCGGCTG GGGTTACGAG CTGGGTGAGG ACAGCTATGC CAAGGTCGAC
CCGACCCTGC AGCACCCGCG CTGCGTGTTC CAGCTGATGA AGCAGCATTA CAGCCGCTAT
ACCCCGGAAC TGGCGAGCAT GACCTGTGGC ATGCCGCAGG ACGCCATGAT GAAGGTCTGG
GAAGAGATCG CCACATGCTC GGCACCGGGC AAGACCATGA CGATTCTCTA TGCACTGGGC
TGGACGCAAC ACTCGATCGG TGCGCAAATC ATCCGCAGTG CAGCCATGGT CCAGTTGCTG
TTGGGCAACG TCGGCATGCC GGGTGGCGGG GTCAACGCCC TGCGGGGGCA CTCCAACATT
CAGGGCCTGA CCGACCTCGG CCTGCTGTCC AACTCGCTGC CGGGTTACCT GACCTTGGCC
GGCGATGCCG AGCAGGATTA CGCCACCTAT ATCGACAAAC GCGCTTCCAA GCCGCTGCGT
CCTGGGCAGC TGTCGTACTG GCAGAACTAC GGCAAGTTCC ACGTCAGCCT GATGAAGGCC
TGGTACGGTG CCAACGCCAC GGCGGAAAAC AACTGGGGCT ATGACTGGCT GCCGAAGCTC
GACGTACCGG CCTACGACGT GCTGCGCATG TTCGAGATGA TGGGCCAAGG CAAGGTCAAC
GGTTACATGT GCCAGGGTTT CAACCCAATC GCCGCGCTGC CGGACAAGAA CCGCGTCACG
GCGGCGCTGG GCAAGCTCAA GTGGCTGGTG ATCATGGACC CGCTGGCCAC CGAGACCTCG
GAGTTCTGGC GCAACGCCGG GCCGTTTAAC GATGTCGACA CGGCCAACAT CCAGACCGAA
GTGATACGCC TGCCCACCAC CTGCTTCGCC GAGGAAGACG GCTCGCTGGT CAACAGCAGC
CGTTGGCTGC AGTGGCACTG GAAGGGCGCC GACGGGCCGG GCGAGACCCG TACCGATGTG
CAGATCATGA GCGAGTTGTT CCTGCGCCTG CGCCAACGCT ACCAGGCTGA AGGCGGCGCC
TACCCAGACG CGATGATGAA CATCAGCTGG CCGTACAAGA TTCCTGACGA GCCGTCTCCA
GAGGAACTGG CCAAGGAAAT GAACGGCTGG GCGGTCACCG ACCTTACCGA CACTACCGGC
GCCACGCTCA AGGCCGGCCA GCAGCTGTCG GGCTTTGCCC AGATGAAGGA CGACGGCAGC
ACGGCATCCG GTTGCTGGAT CTTTGCTGGC TGTTGGACCG AGCAGGGCAA CCAGATGGCC
CGTCGCGACA ACAGCGACCC ATACGGCATG CACCAGGTGC AGAACTGGGC CTGGGCCTGG
CCGGCCAACC GCCGCATCCT CTACAACCGT GCCTCCAGCG ACCCGCAAGG CAAACCGTGG
GACCCGGAGA AAAAGCGCCT GGTGTGGTGG AACGGCAAGG CCTGGACCGG CACCGACGTG
CCGGACTTCA AGGTCGATTC GCCGCCCGAG GCGGGCATGA ACCCGTTCAT CATGAACCCC
GAAGGTGTGG CGCGTTTCTT CGCCATCGAC AAGATGGCCG AAGGCCCGTT CCCCGAGCAC
TACGAGCCAT TTGAAACGCC AATCGGCATC AACCCGCTGC ACCCGCAGAA CAAGAAGGCC
ACCAGCAACC CGGCCGGGCG CATTTTCGAC TCGGTGTGGG ACACCCTCGG CACGCACGAC
GAGTTTCCCT ATGCGGCGAC CACGTACCGG CTGACCGAGC ACTTCCACTT CTGGAGCAAG
CACTGCCGGC TCAACGCCAT TGCCCAACCC GAGCAATTCG TCGAGATCGG CGAGGTGCTG
GCCAACGAGA AAGGCATCAA GGCTGGCGAC CGAGTGCGGG TGTCGAGCAA GCGTGGGCAT
ATCGACGCGG TGGCGGTGGT GACCAAGCGG ATTCGTCCGC TGCAGGTCAA CAACCAGACC
GTGCACCAGA TCGGCATCCC GCTGCACTGG GGGTTCACCG GCGCTACCCG GCATGGCTAC
CTGACCAACA CCCTGGTGCC GTTCCTCGGT GATGGCAATA CGCAGACCCC AGAGTCCAAG
TCGTTCCTCG TCAAAGTGGA GAAACTCTGA
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| Protein sequence | MTNHWSDIAN ANLVLVMGGN AAEAHPCGFK WVTEAKAHNK ARLIVVDPRF TRTASVADYY
APIRTGTDIA FMGGLINYLL STDKIQHEYV RNYTDVSFIV KENYGFEDGL FSGYDEAKRV
YADKSGWGYE LGEDSYAKVD PTLQHPRCVF QLMKQHYSRY TPELASMTCG MPQDAMMKVW
EEIATCSAPG KTMTILYALG WTQHSIGAQI IRSAAMVQLL LGNVGMPGGG VNALRGHSNI
QGLTDLGLLS NSLPGYLTLA GDAEQDYATY IDKRASKPLR PGQLSYWQNY GKFHVSLMKA
WYGANATAEN NWGYDWLPKL DVPAYDVLRM FEMMGQGKVN GYMCQGFNPI AALPDKNRVT
AALGKLKWLV IMDPLATETS EFWRNAGPFN DVDTANIQTE VIRLPTTCFA EEDGSLVNSS
RWLQWHWKGA DGPGETRTDV QIMSELFLRL RQRYQAEGGA YPDAMMNISW PYKIPDEPSP
EELAKEMNGW AVTDLTDTTG ATLKAGQQLS GFAQMKDDGS TASGCWIFAG CWTEQGNQMA
RRDNSDPYGM HQVQNWAWAW PANRRILYNR ASSDPQGKPW DPEKKRLVWW NGKAWTGTDV
PDFKVDSPPE AGMNPFIMNP EGVARFFAID KMAEGPFPEH YEPFETPIGI NPLHPQNKKA
TSNPAGRIFD SVWDTLGTHD EFPYAATTYR LTEHFHFWSK HCRLNAIAQP EQFVEIGEVL
ANEKGIKAGD RVRVSSKRGH IDAVAVVTKR IRPLQVNNQT VHQIGIPLHW GFTGATRHGY
LTNTLVPFLG DGNTQTPESK SFLVKVEKL
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