Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0530 |
Symbol | |
ID | 5868276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 605099 |
End bp | 606649 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641545618 |
Product | hypothetical protein |
Protein accession | YP_001666777 |
Protein GI | 167031546 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGCT CGGAAAGACC AGGTGTTTTC GACATATCGG ATGCAGAGGG AGTGAATGAC TCCGAGCGAT TGCTGATGAG GCTATGCCGA AAGTCGTTCT TGAGCCTGTG GGCCCACGCC AACTTGCACA CTGACCAGGA CATGCACAAT GGGAAGGGAA GCGCGAAAGA GTTTGCCGAT GTAATGGTCG TATTCGGAGA TGACATCGTC ATTTTTTCCG ACAAGCACAT CACCTATCAG TCCGAAACTG ATACCAAGGT TGCTTGGAAG CGCTGGTATA AACGTGCCGT TACTAGTTCT GCAAAGCAGT TGTATGGTGC CAAAAGCTGG CTGGAGCGTT TCCCACATAG GGTGTTTTTG GATTCCAAAT GCACTCGGCC TCTACCCGTG CAGATTCCCG ACATTACAAA GATACGTTTT CACCTTGTCG CAGTGACACG GGGGAGTGCT GAGGCCTGCG CGAAGCACTT CTCAGGCAGC GTCGGCTCGC ACATGATCCA AACCGGCGTG GACCACAACG CCTATGCGGA ACTTCCGTTT ACCACTGGCC CGCTAGATTC TAGTAAAGAA TTTGTCCACG TCTTTGATGA GATCTCCCTC GAAGTACTGA TGCACGAGAT GAGCACCATC AAGGACTTCG TCGAATACCT AGGTGCGCGT AGGGCCTTCT TGCTCAATCC GAATACGATG ATAACGAGTG CAGGGGAAGA GCAACTGATT GCATCTTACT TAATGCATAC TAATGAAAAT GAGCATGCAT TCCATCCTAG TACCGAAAGC GCTCCTCATC ACATCAGCTT CGATGAAACA CTTTATCCTG AACTGCTATC ACGCCCAGAG TACAGGGAGA TGCACGCCCA GAATGAGATA AGTGAATTTT GGGATGCGTT GATCGAAAAA TTTATAACCG TAGGGGATCC AACGATCACT GACCTGGGCG CGAATCAAAA GAATCATGAA ACTGAGCTCG CCCTGCGACT TATGGCAAGT GAAACCAGGT TCATGAGACG TGAGCTATCA CGCCACTTCT TTGAGATGAT GGAACTAGCA AAGGCCGGGC AGTACGTGCG CCGGGCTCGC ACCCTGACTA CACAGCAAGC TCCAGATCTC CTATATATTT TTTTGGCATG TCCGAAGTTT GCAGAGCAGT CCTATGTGGA CTACAGGCAA TACCGAAGTA GGCTTTTGCT TTCGTATGCA CAGTGCGCAA AACTTAAGTT CACTGGAGCT AAGACCATCA TCGCACTTGG TTTCGATCAT CCATTGAAAG ACTATCAAGG GGGCTCCGAA GACGTATGTG TATACATTCG CGATGAATAC ACTGAGGAGG AGCGGACTGA GGTGGAAAGG CTGAGATCGG CGCTTGGAAT CTACGCGGAT TCCAGCACCC CGACAGAGAG CAGGAGCTTT CAGTTTCCGG CGGCGGACAG CCTTCAACTT GGCACCGCCG TCGTTGTTCG GCAAACTGCA AGCAAGCGAA AGCAACTAAA AACAAAGAAA TCAAAAAACA TACAACAGAA GCAAGCGAGA AAAGCTAATC GAAAAAGATA G
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Protein sequence | MSSSERPGVF DISDAEGVND SERLLMRLCR KSFLSLWAHA NLHTDQDMHN GKGSAKEFAD VMVVFGDDIV IFSDKHITYQ SETDTKVAWK RWYKRAVTSS AKQLYGAKSW LERFPHRVFL DSKCTRPLPV QIPDITKIRF HLVAVTRGSA EACAKHFSGS VGSHMIQTGV DHNAYAELPF TTGPLDSSKE FVHVFDEISL EVLMHEMSTI KDFVEYLGAR RAFLLNPNTM ITSAGEEQLI ASYLMHTNEN EHAFHPSTES APHHISFDET LYPELLSRPE YREMHAQNEI SEFWDALIEK FITVGDPTIT DLGANQKNHE TELALRLMAS ETRFMRRELS RHFFEMMELA KAGQYVRRAR TLTTQQAPDL LYIFLACPKF AEQSYVDYRQ YRSRLLLSYA QCAKLKFTGA KTIIALGFDH PLKDYQGGSE DVCVYIRDEY TEEERTEVER LRSALGIYAD SSTPTESRSF QFPAADSLQL GTAVVVRQTA SKRKQLKTKK SKNIQQKQAR KANRKR
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