| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0528 |
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| Symbol | |
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| ID | 5868274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 603834 |
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| End bp | 604250 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641545616 |
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| Product | DNA mismatch endonuclease Vsr |
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| Protein accession | YP_001666775 |
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| Protein GI | 167031544 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.027881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.827941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGAT TGAGCGTCGA GCAGCGTAGC TGGTTAATGA GTCGTATCAA AGGAAAAAAT
ACGACCCCGG AACTTATCGT CAGAAAGTTA GTGTACGGCA TGGGGTATCG TTATCGACTA
CATCTAAAAT ATCTACAAGG ACGGCCAGAT CTTACCTTTC TGAGAAGGAA GAAGGTGATA
TTCGTAAACG GTTGCTTTTG GCATGGCCAC CCTAACTGTA GGTATGGGCG ACTTCCGAAA
ACCCGACTCG AATACTGGCA GGAGAAAATA GAGAAAAACA AAAGAAGAGA TACAGAAAAT
ATTCATGCCC TCCAAGCAGA TGGCTGGCAG GTACTAACGG TCTGGCAATG CGAACTTAGA
AATCTAGAGC AACTGAGGGA AAAACTGCAA AATTTTATAG ATGGGCCAAT AACATAA
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| Protein sequence | MDRLSVEQRS WLMSRIKGKN TTPELIVRKL VYGMGYRYRL HLKYLQGRPD LTFLRRKKVI
FVNGCFWHGH PNCRYGRLPK TRLEYWQEKI EKNKRRDTEN IHALQADGWQ VLTVWQCELR
NLEQLREKLQ NFIDGPIT
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