Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0522 |
Symbol | |
ID | 5868268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 595912 |
End bp | 597432 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641545610 |
Product | transposase IS66 |
Protein accession | YP_001666769 |
Protein GI | 167031538 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.117674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG ACCTTCCCGA TGACCCCGTA CTGCTCAAGC AGATGCTTGC GCAGTTATTG ATGGAGCGCA CGGTCGATAA GGGCCAGATC GTCGATCTCA AAGAGCAGGT CAAGCTACTG CGCGACCGTC TGTTCAGTCG CAAGTCCGAG CAGACCGTTG AAACCAACAC GCCGCAACTC GCGTTGTTCA ACGAGCCGGA AAGCCTGTCG ATACCTCCGG TCGATGACGA CGAAGAAGTG ATCGCGCCAA CACTGCGTCG TGGCAAGCGC AAACCGCTGT CCGCTGACCT GCCGCGCATT GAAGTCATCC ACGAACTGCC CGAACACGAG CAGGCCTGTG CCTGTGGTTG CCGCAAACAC GTGATCGGTG AGGAAACCAG CGAGCAGCTG GATATCGTGC CGATGCAGAT CCGGGTGCTC AAACACATCC GTAAAATTTA CGGCTGCCGT GGTTGTGAAG CCGCTCCGGT CACCGCTGAC AAACCCGCAC AGTTGATCGA GAAGAGCATG GCCAGCCCGA GCGTGCTGGC CATGCTGTTG GCCACCAAGT ATGTCGATGG TTTGCCGCTG CACCGTTTTG AAACGGTGCT GAGCCGACAC GGTATCGAGA TTCCGCGTCA GACTTTGGCA CGCTGGGTGA TTCAGTGCGG TGAGCACCTG CAACCACTGC TGAATCTGAT GCGCGACCGG TTGCTGGAAA GCCCGGTCAT CCATTGCGAT GAAACCCGCG TCCAAGTTCT TAAAGAACCG GATCGAGACC CGACCAGCCA ATCCTGGATG TGGGTGCAAG CCAGTGGGCC ACCGGATCGG AAAGTCGTGC TGTTCGACTA CACCTCCAGC CGTGCGCAGG AGGTGCCGTT GCGCTTGCTG GAAAGTTATC GCGGCTATGT GATGACGGAC GATTACGCCG GCTACAACGC CCTGGCGTTG CAGCCGGGTG TCGAACGATT GGCGTGCATG GCGCATGCGC GTCGCAAGTT TGTTGAAGCT CAGAAAGTGC AGCCCAAGGG CAAAGCCGGA CGCGCGGATA TGGCGCTGTC ATTGATCAAT AAGCTATATG GCATCGAGCG TGAACTGAAG GACGCCAGTG ATGAGCAGCG ATTGACTGGC CGGCAGGAGA AGAGCCTGCC GATCATGGGG CAGTTGAAAA GTTGGCTGGA CAAAACGCAG CCACATGTGA CGTCGCAAAG TGTGCTCGGC AAGGCGGTGA ATTACCTAGC GAGCAATTGG AGTCGGCTGG AGCGTTATGT GGAGGCTGGG TATTTGCCGA TCGACAATAA CCCGGCAGAG CGCGCAATAA AGCCATTTGT GATTGGCCGC AAAGCCTGGC TGTTCAGCGA CACGCCCAAG GGTGCCGCCG CCAGTGCTCA GCTCTACAGT TTAGTCGAGA CCGCCAAGAT CAACGGCCAA GAGCCCTATA CGTGGCTGCG CCACGTACTG GAGCGGCTGC CCCATGCGCA GTCGGTGGCA GATTATGAAG CGCTGTTGCC GTGGAACTGT TCACCGGAAA TGCCACGGTA A
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Protein sequence | MPEDLPDDPV LLKQMLAQLL MERTVDKGQI VDLKEQVKLL RDRLFSRKSE QTVETNTPQL ALFNEPESLS IPPVDDDEEV IAPTLRRGKR KPLSADLPRI EVIHELPEHE QACACGCRKH VIGEETSEQL DIVPMQIRVL KHIRKIYGCR GCEAAPVTAD KPAQLIEKSM ASPSVLAMLL ATKYVDGLPL HRFETVLSRH GIEIPRQTLA RWVIQCGEHL QPLLNLMRDR LLESPVIHCD ETRVQVLKEP DRDPTSQSWM WVQASGPPDR KVVLFDYTSS RAQEVPLRLL ESYRGYVMTD DYAGYNALAL QPGVERLACM AHARRKFVEA QKVQPKGKAG RADMALSLIN KLYGIERELK DASDEQRLTG RQEKSLPIMG QLKSWLDKTQ PHVTSQSVLG KAVNYLASNW SRLERYVEAG YLPIDNNPAE RAIKPFVIGR KAWLFSDTPK GAAASAQLYS LVETAKINGQ EPYTWLRHVL ERLPHAQSVA DYEALLPWNC SPEMPR
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