Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0504 |
Symbol | secY |
ID | 5868250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 577606 |
End bp | 578937 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641545592 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001666751 |
Protein GI | 167031520 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000390206 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC AAGGTGCTCT CTCTTCGCTC GGTAAGGGCG GGATGTCGGA ACTCTGGGCT CGTCTGCGCT TTCTGTTCAT GGCGATCATC GTCTATCGGA TAGGTGCGCA TATCCCGGTT CCCGGCATCA ATCCGGACCG TCTGGCGGAT CTGTTTCGGC AGAATGAGGG GACCATTCTT AGCTTGTTCA ACATGTTTTC CGGTGGCGCG CTCGAGCGCA TGAGCATCTT TGCACTGGGG ATCATGCCGT ACATTTCGGC ATCGATCATC ATGCAGCTGA TGACCGCGGT CAGCCCGCAA CTGGAGCAGT TGAAGAAGGA AGGTGAAGCT GGCCGTCGCA AGATCAGCCA GTACACCCGC TACGGCACCG TTATCCTGGC ACTGGTTCAA GCCATTGGCA TGTCCATTGG CCTGGCCAAC CAGGGCGTGG CGTTTTCTGT GGGCCTGGGC TTCCATGTCG TCGCCGTCTC CACCTTCGTG GCAGGCGCGA TGTTCATGAT GTGGCTGGGC GAGCAGATCA CCGAGCGCGG TGTGGGCAAC GGTATCTCGA TGTTGATCTT CGCAGGTATC GTTGCCGGTC TTCCGAGAGC AATCGGGCAG TCTTTCGAGT CTGCACGCAC AGGCGATATC AATATTTTCG CCTTGGTCGC TATCGGTTTG CTGGCAGTAG CGATTATCGG TTTCGTGGTG TTCATTGAGC GTGGTCAGCG TCGTATCGCC GTTCACTACG CCAAGCGTCA GCAGGGCCGC AAGGTCTTCG CTGCGCAGAC CAGCCACTTG CCGTTGAAGG TGAACATGGC GGGGGTTATC CCGGCCATTT TCGCGAGCAG CATTTTGCTG TTCCCGGCTT CGCTGGGTGC CTGGTTCGGT CAGTCCGAAG GTATGGGCTG GCTGCAGGAC ATCTCGCAGT CGATCGCTCC TGGTCAGCCG TTGAACATTC TGCTGTTTAG TGCAGGGATC ATTTTCTTCT GCTTCTTCTA CACAGCATTG ATGTTCAATC CGAAAGACGT AGCGGAAAAC CTGAAGAAGT CCGGTGCCTT TATTCCGGGT ATCCGTCCTG GTGAGCAGTC GGCGCGCTAC ATTGATGGCG TTCTGACCCG TTTGACCATG TTCGGTGCTC TTTACATGAT GGCCGTCTGC CTTCTGCCCC AGTTCCTGGT GGTGGCAGCA AATGTGCCGT TCTACCTTGG CGGGACCTCG TTGCTGATTG TGGTAGTGGT TGTGATGGAC TTCATGTCCC AAGTACAATC GCACCTCGTT TCGCACCAGT ACGAATCCCT GATGAAGAAA GCCAACCTGA AAGGCTACGG TGGCAGCGGT CTGCTGCGCT GA
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Protein sequence | MAKQGALSSL GKGGMSELWA RLRFLFMAII VYRIGAHIPV PGINPDRLAD LFRQNEGTIL SLFNMFSGGA LERMSIFALG IMPYISASII MQLMTAVSPQ LEQLKKEGEA GRRKISQYTR YGTVILALVQ AIGMSIGLAN QGVAFSVGLG FHVVAVSTFV AGAMFMMWLG EQITERGVGN GISMLIFAGI VAGLPRAIGQ SFESARTGDI NIFALVAIGL LAVAIIGFVV FIERGQRRIA VHYAKRQQGR KVFAAQTSHL PLKVNMAGVI PAIFASSILL FPASLGAWFG QSEGMGWLQD ISQSIAPGQP LNILLFSAGI IFFCFFYTAL MFNPKDVAEN LKKSGAFIPG IRPGEQSARY IDGVLTRLTM FGALYMMAVC LLPQFLVVAA NVPFYLGGTS LLIVVVVVMD FMSQVQSHLV SHQYESLMKK ANLKGYGGSG LLR
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