Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0501 |
Symbol | rpsE |
ID | 5868247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 576488 |
End bp | 576988 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641545589 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001666748 |
Protein GI | 167031517 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000260695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA ACGATCAAAA GCGCGACGAA GGCTACATCG AGAAGCTGGT TCAAGTTAAC CGCGTTGCCA AAACCGTAAA AGGCGGCCGT ATCTTCACCT TCACCGCGCT GACCGTGGTA GGTGATGGTA AAGGTCGTGT TGGCTTCGGC CGTGGCAAGT CGCGCGAAGT ACCAGCCGCG ATCCAGAAAG CCATGGAAGC TGCTCGCCGC AACATGATTC AGGTTGACCT GAAGGGCACC ACCCTGCAGT ACGCCACCAA GGCTGCCCAC GGCGCCTCGA AGGTTTACAT GCAGCCTGCC TCGGAAGGTA CCGGTATCAT CGCCGGTGGC GCAATGCGTG CTGTCCTGGA AGTTGCTGGT GTTCAGAACG TTCTGGCCAA GTGCTACGGT TCGACCAACC CAGTGAACGT GGTTTACGCC ACCTTCAAGG GTCTGAAAGC CATGCAATCT CCTGAATCCA TTGCTGCCAA GCGCGGCAAG AGCGTCGAGG AGATCTTCTG A
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Protein sequence | MANNDQKRDE GYIEKLVQVN RVAKTVKGGR IFTFTALTVV GDGKGRVGFG RGKSREVPAA IQKAMEAARR NMIQVDLKGT TLQYATKAAH GASKVYMQPA SEGTGIIAGG AMRAVLEVAG VQNVLAKCYG STNPVNVVYA TFKGLKAMQS PESIAAKRGK SVEEIF
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