| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0500 |
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| Symbol | rplR |
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| ID | 5868246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 576134 |
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| End bp | 576484 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641545588 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001666747 |
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| Protein GI | 167031516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000118078 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACA AAAAAGTTAT TCGACTGCGT CGCGCTCGCA AAGCACGTCT CAAGATGCAC
GAACTCGAAG TCGTGCGCCT GTGCGTGTTC CGCTCCTCGC AGCACATCTA CGCCCAGGTC
ATTTCGGCCG ACGGCAGCAA GGTTCTGGCA AGCGCCTCGA CCTTGGACAA AGACCTGCGT
GATGGCGCCA CTGGCAACAT CGACGCGGCC ACTAAGGTTG GCAAGCTGGT AGCTGAGCGT
GCGAAAGCCG CCGGTGTATC TCAAGTTGCC TTTGACCGTT CCGGCTTCAA GTACCATGGC
CGCGTCAAAG CGCTGGCTGA TGCTGCTCGT GAAGGCGGGC TGGAGTTCTA A
|
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| Protein sequence | MTDKKVIRLR RARKARLKMH ELEVVRLCVF RSSQHIYAQV ISADGSKVLA SASTLDKDLR
DGATGNIDAA TKVGKLVAER AKAAGVSQVA FDRSGFKYHG RVKALADAAR EGGLEF
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