| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0479 |
|---|
| Symbol | rpsL |
|---|
| ID | 5868225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 563893 |
|---|
| End bp | 564264 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641545567 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001666726 |
|---|
| Protein GI | 167031495 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.135027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTTCGGTCGA GAAGTCCGAC
GTTCCTGCGC TGCAGAACTG CCCGCAACGT CGTGGCGTGT GCACCCGTGT GTACACCACC
ACGCCGAGAA AACCTAACTC GGCACTGCGT AAAGTATGCC GTGTGCGTCT GACCAACGGT
TTCGAGGTTT CCTCGTACAT CGGTGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTCGTC
CTGATCCGTG GCGGCCGTGT AAAAGACTTG CCAGGTGTTC GTTACCACAC CGTTCGCGGC
TCTCTGGATA CTTCGGGCGT TAAAGGCCGT AACCAGGGTC GTTCGAAGTA CGGTACCAAG
CGTCCGAAGT AA
|
|---|
| Protein sequence | MATINQLVRQ PRKRSVEKSD VPALQNCPQR RGVCTRVYTT TPRKPNSALR KVCRVRLTNG
FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKGR NQGRSKYGTK
RPK
|
|---|
| |