| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0474 |
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| Symbol | rplA |
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| ID | 5868220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 553288 |
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| End bp | 553983 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641545562 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001666721 |
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| Protein GI | 167031490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0821941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC TGACCAAGCG CCAAAAGGCA ATCGCCGAAA AAATCGAAGC AGGCAAGTCC
TACAACTTCG AAGAAGCGGC AACTCTGCTG GCTTCGCTGC CTGCTGCCAA GTTCGTCGAG
TCCTACGACA TCGCCGTTAA CCTCGGTGTT GACCCGCGTA AATCCGACCA GGTCGTACGT
AGCGCTACTG TGCTGCCACA CGGCACTGGT AAGACCGTTC GCGTTGCTGT CTTCACCCAG
GGTCCAGCTG CTGAAGCCGC TCTGGCTGCC GGCGCTGACC GTGTAGGTAT GGACGATCTG
GCTGCCGAAA TGAAAGCCGG CGACCTGAAC TATGACGTCG TCATCGCATC GCCTGATGCC
ATGCGCGTTG TAGGTCAACT GGGTCAGGTT CTGGGTCCTC GCGGCCTGAT GCCTAACCCG
AAAGTTGGTA CCGTTAGCCC AGACGTAGCC ACTGCCGTGA AAAACGCCAA GGCTGGTCAG
GTTCGCTACC GTACCGACAA AAACGGTATC ATCCACACTT CCGTTGGCAA GGTCGGCTTT
GAAGCTGGCA AGCTGAAGGA AAACGTTGAG GCCCTGATCG CTGATCTGAA GCGTATCAAG
CCAGCTTCTT CGAAAGGTAT CTACGTCAAG CGCGTTACCC TGAGCACCAC CATGGGCCCA
GGTCTGGTCA TCGATCAGAG CTCGCTGAAC GTGTAA
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| Protein sequence | MAKLTKRQKA IAEKIEAGKS YNFEEAATLL ASLPAAKFVE SYDIAVNLGV DPRKSDQVVR
SATVLPHGTG KTVRVAVFTQ GPAAEAALAA GADRVGMDDL AAEMKAGDLN YDVVIASPDA
MRVVGQLGQV LGPRGLMPNP KVGTVSPDVA TAVKNAKAGQ VRYRTDKNGI IHTSVGKVGF
EAGKLKENVE ALIADLKRIK PASSKGIYVK RVTLSTTMGP GLVIDQSSLN V
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