| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0467 |
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| Symbol | |
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| ID | 5868209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 547808 |
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| End bp | 548767 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641545551 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_001666714 |
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| Protein GI | 167031483 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.800228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGT TGTTGAATCT TCTCAAGGAT GGCCGGTTCC ATTCCGGAGA AGCTCTGGGG
GAAGCCCTCG GGGTGAGTCG CAGCGCCGTT TGGAAACAGC TGCAGCACCT GGAAGGCGAG
CTGAACCTCA CCATTCACAA GGTTCGTGGG CGCGGCTATC AGCTGGCGAC ACCACTAGCT
TTGCTCGAGG CTCAGGCAAT AGCCGGCTTT GCCGAAAGCG AGCAGTGGCC GGTTTTCATC
CATGAAAGCG TCGACTCGAC CAATGCCGAA GGCTTGAGGC TTGCCAATCA GGGGCAGGCA
GCGCCATTTG TGGTGCTGGC TGAGCGGCAG AGTGCCGGCC GCGGTCGACG TGGCCGCCAA
TGGGTCAGCC CATTTGCCGA GAACCTCTAT TACAGCCTTG TCTTGCGTGT GGATGGCGGC
ATGCGCCAGC TCGAAGGCTT GAGCCTGGTG GTGGGGGTTG CGGTAATGCG CACTCTGCAG
GCGTTCGGCG TAAAAGATGT AGGGCTCAAA TGGCCCAATG ACGTGTTGGT TCGCGGGCAG
AAGATCACCG GTATTCTCCT GGAGCTGGTG GGTGATCCGG CCGACGTCTG TCATGTGGTA
CTGGGTATCG GTATCAATGT GAACATGCAG GCCAACGACC AGGTCGACCA GGAGTGGACC
TCGATGCGAC GTGAGGTGGG TGCGGCAATA GATCGCAACC ACTTGGTAGC GTCGCTCAAT
CAGCAATTGC AGCATGAATT GGCACGTCAT CGTCGCTATG GGTTTGCCGC ATTCCAAGAG
GAGTGGGAGC AGGCGCACCT TTGGCAAGGG CGCAATGTTT CACTGGTTGC CGGCAGTACG
CGTATTGATG GCGTGGTTCT TGGCGTCGAC GGGCAGGGCG GCTTGCGCCT TGAGGTGGAC
GGAGTTGAAA AGAGCTTCAG TGGTGGTGAG CTCAGTTTGA GGTTGCGTGA TGATTCTTGA
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| Protein sequence | MLKLLNLLKD GRFHSGEALG EALGVSRSAV WKQLQHLEGE LNLTIHKVRG RGYQLATPLA
LLEAQAIAGF AESEQWPVFI HESVDSTNAE GLRLANQGQA APFVVLAERQ SAGRGRRGRQ
WVSPFAENLY YSLVLRVDGG MRQLEGLSLV VGVAVMRTLQ AFGVKDVGLK WPNDVLVRGQ
KITGILLELV GDPADVCHVV LGIGINVNMQ ANDQVDQEWT SMRREVGAAI DRNHLVASLN
QQLQHELARH RRYGFAAFQE EWEQAHLWQG RNVSLVAGST RIDGVVLGVD GQGGLRLEVD
GVEKSFSGGE LSLRLRDDS
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