| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0465 |
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| Symbol | |
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| ID | 5868204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 539229 |
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| End bp | 540650 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545546 |
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| Product | peptidase M23B |
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| Protein accession | YP_001666712 |
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| Protein GI | 167031481 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases
[COG3061] Cell envelope opacity-associated protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000494323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.161916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG AACCGCCTAA AGCGCCCCCG CTTTATCCGA AGAGCCATCT GTTGGCCGCC
AGCGGCATCG CCGCCCTGCT CAGCCTGGCT TTGCTGGTAT TTCCCTCCAG CGAAGTGGAA
GCCAAGAAAA CCACCCTCAA CCTCGAGCTG GAAAGCCCTG CCGAGCAGCT GAAAGACGAA
TCCCGCGCAG CGCCGCTGGT GCAGGCAGAA GGAGAGCAAG GCTCGCCTTT CGCCCAGATC
GAAGACGCTG CCCCCGAAAC CCAGAAGGCC GAACAGCAAA CCCCCACCGC CGAACCCGTC
GCAGAAGCCG CCAAGGAACC TGGCCACCGC GAGGTTACCG TGGCCCGTGG CGATACTCTG
TCCACGCTGT TCGCCAAGGT TGGGCTGCCG GCCAATGCCG TGCATGACGT GCTGGCAAGT
AACAAGCAGG CCAAGCAGTT CAGCCAGCTC AAGCACGGTC AAGTGCTGCA GTTCGAACTC
GACAAGGATG GCCAACTGGC CAGCCTGCAC AGCAAGGTCA GCAACCTCGA AACCATTCGC
CTGACCAAGA CCGCCAAGGG CTATGCCTTC AACCGCGAAA TCAGCAAGCC GGTGGTGCGT
ACCGCCTACG CCCACGGTGT GATCAAGAGC TCGCTGTCGG CCTCGGCCCA GCGTGCCGGC
CTGTCCCACA GCATGACCAT GGACATGGCT CGCGTATTGG GCTACGACAT CGACTTTGCC
CAGGATATTC GCCCAGGCGA CGAGTTCGAC GTGGTCTACG AGCAGAAGGT GATGGACGGC
AAGGTCGTCG GCACCGGCAA CATCCTGTCC GCCCGCTTTA CCAACCGCGG CAAAACCTAC
ACCGCCGTGC GTTATACCAA CAAGCAGGGC AACAGTACCT ACTACACCGC AGACGGCAAC
AGCCTGCGCA AGGCCTTCAT CCGTACCCCG GTCGACTTCG CTCGCATCAG CTCGCGCTTT
TCCGCTGGCC GCAAGCACCC AATCCTGAAC AAGATTCGCG CCCACAAAGG CGTAGACTAC
GCTGCCCCGC GCGGTACGCC GATCAAGGCT GCCGGTGACG GCCGCATCGA ACTGGCCGGG
CGCCGTGGTG GCTACGGCAA TACCGTGATC ATCCAACACG GCAACCGCTA CAAGACGCTG
TACGGCCATA TGCAAGGCTT TGCCAAGGGC ATCAAGACCG GCAGTTCGGT CAAGCAGGGC
CAGATCATTG GCTACATCGG TACCACCGGC CTGTCCACCG GGCCGCACCT GCACTACGAG
TTCCAGGTCA ACGGTGTGCA CGTCGACCCG CTGAGCCAGA AGGTACCAAT GGCCGACCCG
ATCGCCAAGA ACGAGCGCCA GCGCTTCCTG CAGCAGAGTC AGCCGCTGAT CGCCCGCATG
GATCAGGAAA AGGCCACTCT GCTCGCAGCG AACAAGCGCT AA
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| Protein sequence | MTNEPPKAPP LYPKSHLLAA SGIAALLSLA LLVFPSSEVE AKKTTLNLEL ESPAEQLKDE
SRAAPLVQAE GEQGSPFAQI EDAAPETQKA EQQTPTAEPV AEAAKEPGHR EVTVARGDTL
STLFAKVGLP ANAVHDVLAS NKQAKQFSQL KHGQVLQFEL DKDGQLASLH SKVSNLETIR
LTKTAKGYAF NREISKPVVR TAYAHGVIKS SLSASAQRAG LSHSMTMDMA RVLGYDIDFA
QDIRPGDEFD VVYEQKVMDG KVVGTGNILS ARFTNRGKTY TAVRYTNKQG NSTYYTADGN
SLRKAFIRTP VDFARISSRF SAGRKHPILN KIRAHKGVDY AAPRGTPIKA AGDGRIELAG
RRGGYGNTVI IQHGNRYKTL YGHMQGFAKG IKTGSSVKQG QIIGYIGTTG LSTGPHLHYE
FQVNGVHVDP LSQKVPMADP IAKNERQRFL QQSQPLIARM DQEKATLLAA NKR
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