| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0460 |
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| Symbol | |
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| ID | 5868199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 534989 |
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| End bp | 535945 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545541 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001666707 |
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| Protein GI | 167031476 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0985437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTAC CTGCCTTGCT CGAACAACGC TTGCGCCTGC CTGTGGTCGC GGCGCCGATG
TTCCTGATCT CCAACCCCAA ACTGGTGCTG GCCTGCTGCG CCAGCGGTGT GGTCGGCAGT
TTCCCGGCCC TTAACCAGCG CGACAGCGCC GGTTTCAAGG CCTGGCTGGA GGAGATCGAG
GCGGGCCTGA CGCAATTGCA GGCGCCAGCC CCCTATGCCG TCAACCTGAT CGTGCACCCG
ACCAACCCAC GCCTGCAGGC CGACCTGGCC TTGTGCGTAG AACATCGCGT GCCGATCGTC
ATCACCAGCC TGGGGGCGGT AAAGGAAGTG GTCGACGCCG TGCATGGCTA TGGCGGCCTG
GTGTTCCACG ATGTCACCAC TCGCCGCCAT GCCGAGAAAG CCGCCGAAGC AGGTGTCGAT
GGCCTGATCG CCGTCGCCGC AGGTGCGGGT GGCCACGCCG GCACCTGGAG CCCGTTCGCC
CTGGCAGCGG AAATTCGTCA GTTTTTCGAC AAGACCCTGC TGCTGGCTGG TTGCATCAAC
CACGGCCACG AAATCCTCGC GGCACAATTG CTGGGCGCCG ATCTGGCCTA CATGGGCACG
CGCTTCATCG CCACCGCAGA AAGCCACGCC CAGGATGCCT ACAAGCAGAT GCTGCTCGAT
GCCCATGCCG CCGACATCAT CCACACCCCG GCAGTGTCCG GCATCCCTGC CAGCTTCCTG
CGTTCGAGCC TGGAGCAGGC CGGCTATGAC ATGAATGCCC TCAAGAGCGG CCACGAGCAA
GGCAAGCTCA AGCCGATCGA CGACGAGGCT AAAGCCTGGA AGACCGTATG GTCGGCGGGC
CAGGGCGTCG GCGAAATCCA TGACCTGCCC AGCACCACTG AATTGATCGA ACGGCTCCAA
AAGGAGTACC GGGAAGCCTT GGAGCGCTGC CAGGTTCTGC GCATCCGCAC CTTGTAG
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| Protein sequence | MSLPALLEQR LRLPVVAAPM FLISNPKLVL ACCASGVVGS FPALNQRDSA GFKAWLEEIE
AGLTQLQAPA PYAVNLIVHP TNPRLQADLA LCVEHRVPIV ITSLGAVKEV VDAVHGYGGL
VFHDVTTRRH AEKAAEAGVD GLIAVAAGAG GHAGTWSPFA LAAEIRQFFD KTLLLAGCIN
HGHEILAAQL LGADLAYMGT RFIATAESHA QDAYKQMLLD AHAADIIHTP AVSGIPASFL
RSSLEQAGYD MNALKSGHEQ GKLKPIDDEA KAWKTVWSAG QGVGEIHDLP STTELIERLQ
KEYREALERC QVLRIRTL
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