Gene PputGB1_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0457 
Symbol 
ID5868196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp533024 
End bp533671 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID641545538 
Productubiquinone biosynthesis protein COQ7 
Protein accessionYP_001666704 
Protein GI167031473 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.314163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG AACGTCACTA CTCGCCGCTC GACCGCTTGT TGCTGCAGGC CGATACCGCC 
ATGCGCACCT TGCTGCCCTT CAGCGGCCAA CCCGCCCGCC CATCGCCGGC CATCATCCAG
CCAGACGCCG ACCTGGACGA GCAACAATCC CGCCACATTG CCGGGCTCAT GCGCATCAAC
CACACCGGTG AAGTCTGCGC CCAAGCGCTG TACCAGGGCC AGGCACTGAC CGCCAAGCTG
CCCGAAGTGC GCAAGGCCAT GGAGCATGCC GCCGAGGAAG AAATCGACCA CCTGGCCTGG
TGCGAACAGC GGATTCGCCA GCTGAACAGC CACCCGAGTG TGCTCAACCC TCTTTTCTAT
GGCATGTCGT TCGGCATCGG CGCACTCGCC GGGCTGGTCA GCGACAAGGT CAGCCTGGGC
TTCGTCGCCG CTACCGAGCA TCAAGTGTGC AAGCACCTCG ACGAGCACCT GGAGCAGATC
CCGCACGAAG ATGAAAAATC CCGGGCCATT CTCGAGCAGA TGCGCATCGA CGAAGAGCAG
CACGCCGAGT CTGCACTGGA AGCCGGTGGT TATCGCTTCC CGGCTCCGGT CCGTTTTGGC
ATGAGCTTGC TGGCCAAGGT CATGACCAAG AGCACCTACC GCATCTGA
 
Protein sequence
MATERHYSPL DRLLLQADTA MRTLLPFSGQ PARPSPAIIQ PDADLDEQQS RHIAGLMRIN 
HTGEVCAQAL YQGQALTAKL PEVRKAMEHA AEEEIDHLAW CEQRIRQLNS HPSVLNPLFY
GMSFGIGALA GLVSDKVSLG FVAATEHQVC KHLDEHLEQI PHEDEKSRAI LEQMRIDEEQ
HAESALEAGG YRFPAPVRFG MSLLAKVMTK STYRI