Gene PputGB1_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0454 
Symbol 
ID5868193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp530620 
End bp531264 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID641545535 
ProductcAMP-regulatory protein 
Protein accessionYP_001666701 
Protein GI167031470 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.993891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.32004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCT CCGCCCTACC CGCCAAGATC AAGAACATCG ACAAGTTGCT GGTGCACTGC 
CAGCGCCGCC GCTACACCGC CAAAAGCAAC ATCATCTGCG CCGGCGACCG GGCCGAGACT
CTGTCGTTCA TCATCAAGGG TTCGGTCACC ATCCTCATCG AGGACGATGA CGGCCATGAA
ATGATCATCG CCTACCTTAA CAATGGCGAT TTCTTTGGCG AGCTGGGCCT GTTCGAGCCC
GTCGAGGGCG AACAGCAGCG CAGTGCCTGG GTGCGCGCCA AAACCGAGTG CGAAGTGGCC
GAAATCAGCT ACGAGAAGTT TCGCGAACTG GCGCGCCAGG ACCCAGAAAT TCTCTACGCC
CTGGGCAGCC AGATGGCCCA GCGCCTACGC AACACTACGC GCAAAGTCGG CGACTTGGCA
TTCTTCGACG TGACCGGTCG AGTAGCCCGT TGCCTGCTGG AACTGTGCAA GCAACCCGAC
GCCATGACCC ATCCCGATGG CATGCAGATC AAGATTACCC GGCAGGAAAT CGGCCGTATC
GTCGGTTGCT CGCGGGAAAT GGTCGGCCGC GTCCTCAAGG ACCTCGAAGA GCGCAGCCTG
GTACAGGTGA AAGGCAAGAC CATGGTGGTC TACGGTACCC GCTAG
 
Protein sequence
MVASALPAKI KNIDKLLVHC QRRRYTAKSN IICAGDRAET LSFIIKGSVT ILIEDDDGHE 
MIIAYLNNGD FFGELGLFEP VEGEQQRSAW VRAKTECEVA EISYEKFREL ARQDPEILYA
LGSQMAQRLR NTTRKVGDLA FFDVTGRVAR CLLELCKQPD AMTHPDGMQI KITRQEIGRI
VGCSREMVGR VLKDLEERSL VQVKGKTMVV YGTR